Task-Specific Transformer-Based Language Models in Health Care: Scoping Review.

IF 3.1 3区 医学 Q2 MEDICAL INFORMATICS
Ha Na Cho, Tae Joon Jun, Young-Hak Kim, Heejun Kang, Imjin Ahn, Hansle Gwon, Yunha Kim, Jiahn Seo, Heejung Choi, Minkyoung Kim, Jiye Han, Gaeun Kee, Seohyun Park, Soyoung Ko
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引用次数: 0

Abstract

Background: Transformer-based language models have shown great potential to revolutionize health care by advancing clinical decision support, patient interaction, and disease prediction. However, despite their rapid development, the implementation of transformer-based language models in health care settings remains limited. This is partly due to the lack of a comprehensive review, which hinders a systematic understanding of their applications and limitations. Without clear guidelines and consolidated information, both researchers and physicians face difficulties in using these models effectively, resulting in inefficient research efforts and slow integration into clinical workflows.

Objective: This scoping review addresses this gap by examining studies on medical transformer-based language models and categorizing them into 6 tasks: dialogue generation, question answering, summarization, text classification, sentiment analysis, and named entity recognition.

Methods: We conducted a scoping review following the Cochrane scoping review protocol. A comprehensive literature search was performed across databases, including Google Scholar and PubMed, covering publications from January 2017 to September 2024. Studies involving transformer-derived models in medical tasks were included. Data were categorized into 6 key tasks.

Results: Our key findings revealed both advancements and critical challenges in applying transformer-based models to health care tasks. For example, models like MedPIR involving dialogue generation show promise but face privacy and ethical concerns, while question-answering models like BioBERT improve accuracy but struggle with the complexity of medical terminology. The BioBERTSum summarization model aids clinicians by condensing medical texts but needs better handling of long sequences.

Conclusions: This review attempted to provide a consolidated understanding of the role of transformer-based language models in health care and to guide future research directions. By addressing current challenges and exploring the potential for real-world applications, we envision significant improvements in health care informatics. Addressing the identified challenges and implementing proposed solutions can enable transformer-based language models to significantly improve health care delivery and patient outcomes. Our review provides valuable insights for future research and practical applications, setting the stage for transformative advancements in medical informatics.

医疗保健中基于特定任务转换器的语言模型:范围审查。
背景:基于转换器的语言模型通过推进临床决策支持、患者互动和疾病预测,已显示出彻底改变医疗保健的巨大潜力。然而,尽管基于转换器的语言模型发展迅速,但在医疗环境中的应用仍然有限。部分原因在于缺乏全面的综述,这阻碍了对其应用和局限性的系统了解。由于没有明确的指导原则和综合信息,研究人员和医生在有效使用这些模型方面都面临着困难,导致研究工作效率低下,与临床工作流程的整合缓慢:本范围综述通过研究基于医学转换器的语言模型,并将其分为对话生成、问题解答、总结、文本分类、情感分析和命名实体识别等 6 项任务,填补了这一空白:我们按照 Cochrane 范围综述协议进行了范围综述。我们在谷歌学术和PubMed等数据库中进行了全面的文献检索,涵盖了2017年1月至2024年9月期间的出版物。纳入了涉及医疗任务中变压器衍生模型的研究。数据分为 6 个关键任务:我们的主要发现揭示了将基于变压器的模型应用于医疗任务的进步和关键挑战。例如,MedPIR 等涉及对话生成的模型显示了前景,但面临隐私和伦理方面的问题,而 BioBERT 等问题解答模型提高了准确性,但在复杂的医学术语方面却举步维艰。BioBERTSum 摘要模型通过压缩医学文本来帮助临床医生,但需要更好地处理长序列:本综述试图提供对基于转换器的语言模型在医疗保健中的作用的综合理解,并为未来的研究方向提供指导。通过应对当前的挑战和探索现实世界的应用潜力,我们预计医疗信息学将得到显著改善。应对已发现的挑战并实施建议的解决方案,可使基于转换器的语言模型显著改善医疗服务的提供和患者的治疗效果。我们的综述为未来的研究和实际应用提供了宝贵的见解,为医疗信息学的变革性进步奠定了基础。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
JMIR Medical Informatics
JMIR Medical Informatics Medicine-Health Informatics
CiteScore
7.90
自引率
3.10%
发文量
173
审稿时长
12 weeks
期刊介绍: JMIR Medical Informatics (JMI, ISSN 2291-9694) is a top-rated, tier A journal which focuses on clinical informatics, big data in health and health care, decision support for health professionals, electronic health records, ehealth infrastructures and implementation. It has a focus on applied, translational research, with a broad readership including clinicians, CIOs, engineers, industry and health informatics professionals. Published by JMIR Publications, publisher of the Journal of Medical Internet Research (JMIR), the leading eHealth/mHealth journal (Impact Factor 2016: 5.175), JMIR Med Inform has a slightly different scope (emphasizing more on applications for clinicians and health professionals rather than consumers/citizens, which is the focus of JMIR), publishes even faster, and also allows papers which are more technical or more formative than what would be published in the Journal of Medical Internet Research.
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