Unveiling the interspecies correlation and sensitivity factor analysis of rat and mouse acute oral toxicity of antimicrobial agents: first QSTR and QTTR Modeling report.

IF 2.2 4区 医学 Q3 TOXICOLOGY
Toxicology Research Pub Date : 2024-11-16 eCollection Date: 2024-12-01 DOI:10.1093/toxres/tfae191
Purusottam Banjare, Anjali Murmu, Balaji Wamanrao Matore, Jagadish Singh, Ester Papa, Partha Pratim Roy
{"title":"Unveiling the interspecies correlation and sensitivity factor analysis of rat and mouse acute oral toxicity of antimicrobial agents: first QSTR and QTTR Modeling report.","authors":"Purusottam Banjare, Anjali Murmu, Balaji Wamanrao Matore, Jagadish Singh, Ester Papa, Partha Pratim Roy","doi":"10.1093/toxres/tfae191","DOIUrl":null,"url":null,"abstract":"<p><p>This study aims to identify toxic potential and environmental hazardousness of antimicrobials. In this regard, the available experimental toxicity data with rat and mouse acute oral toxicity have been gathered from ChemID Plus database (<i>n</i> = 202) and subjected to data curation. Upon the data curation 51 and 68 compounds were left for the rat and mouse respectively for the modeling. The quantitative structure toxicity relationship (QSTR) and interspecies correlation analysis by quantitative toxicity-toxicity relationship (QTTR) modeling was approached in this study. The models were developed from 2D descriptors under OECD guidelines by using multiple linear regressions (MLR) with genetic algorithm (GA) for feature selection as a chemometric tool. The developed models were robust (Q <sup><b>2</b></sup> <sub><b>LOO</b></sub>  = 0.600-0.679) and predictive enough (Q <sup><b>2</b></sup> F <sub><b>n</b></sub>  = 0.626-0.958, CCC <sub><b>Ext</b></sub>  = 0.840-0.893). The leverage approach of applicability domain (ad) analysis assures the model's reliability. The antimicrobials without experimental toxicity values were classified as high, moderate and low toxic based on prediction and ad. The occurrence of the same classification from QSTR and QTTR models revealed the reliability of QTTR models.Finally, the applied <i>\"sensitivity factor analysis\"</i> typifies the sensitivity of chemicals toward each species. Overall, the first report will be helpful in the toxicity assessment of upcoming antimicrobials in rodents.</p>","PeriodicalId":105,"journal":{"name":"Toxicology Research","volume":"13 6","pages":"tfae191"},"PeriodicalIF":2.2000,"publicationDate":"2024-11-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11569388/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Toxicology Research","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1093/toxres/tfae191","RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/12/1 0:00:00","PubModel":"eCollection","JCR":"Q3","JCRName":"TOXICOLOGY","Score":null,"Total":0}
引用次数: 0

Abstract

This study aims to identify toxic potential and environmental hazardousness of antimicrobials. In this regard, the available experimental toxicity data with rat and mouse acute oral toxicity have been gathered from ChemID Plus database (n = 202) and subjected to data curation. Upon the data curation 51 and 68 compounds were left for the rat and mouse respectively for the modeling. The quantitative structure toxicity relationship (QSTR) and interspecies correlation analysis by quantitative toxicity-toxicity relationship (QTTR) modeling was approached in this study. The models were developed from 2D descriptors under OECD guidelines by using multiple linear regressions (MLR) with genetic algorithm (GA) for feature selection as a chemometric tool. The developed models were robust (Q 2 LOO  = 0.600-0.679) and predictive enough (Q 2 F n  = 0.626-0.958, CCC Ext  = 0.840-0.893). The leverage approach of applicability domain (ad) analysis assures the model's reliability. The antimicrobials without experimental toxicity values were classified as high, moderate and low toxic based on prediction and ad. The occurrence of the same classification from QSTR and QTTR models revealed the reliability of QTTR models.Finally, the applied "sensitivity factor analysis" typifies the sensitivity of chemicals toward each species. Overall, the first report will be helpful in the toxicity assessment of upcoming antimicrobials in rodents.

揭示大鼠和小鼠急性口服抗菌剂毒性的种间相关性和敏感性因子分析:首份 QSTR 和 QTTR 模型报告。
本研究旨在确定抗菌素的毒性潜力和环境危害。为此,我们从 ChemID Plus 数据库(n = 202)中收集了现有的大鼠和小鼠急性口服毒性实验数据,并进行了数据整理。经数据整理后,大鼠和小鼠分别留下了 51 和 68 个化合物用于建模。本研究采用定量毒性-毒性关系(QTTR)模型进行定量结构毒性关系(QSTR)和种间相关性分析。模型是根据 OECD 准则,利用多重线性回归(MLR)和遗传算法(GA)作为化学计量学工具进行特征选择,从二维描述符中建立的。所开发的模型具有很强的鲁棒性(Q 2 LOO = 0.600-0.679)和足够的预测性(Q 2 F n = 0.626-0.958,CCC Ext = 0.840-0.893)。适用域(ad)分析的杠杆方法确保了模型的可靠性。根据预测值和 ad 值,将没有实验毒性值的抗菌素分为高毒、中毒和低毒。最后,应用 "敏感性因子分析 "对化学品对每个物种的敏感性进行了典型分析。总之,第一份报告将有助于对即将上市的抗菌药物进行啮齿动物毒性评估。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Toxicology Research
Toxicology Research TOXICOLOGY-
CiteScore
3.60
自引率
0.00%
发文量
82
期刊介绍: A multi-disciplinary journal covering the best research in both fundamental and applied aspects of toxicology
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信