Two for tau: Automated model discovery reveals two-stage tau aggregation dynamics in Alzheimer’s disease

Q3 Engineering
Charles A. Stockman , Alain Goriely , Ellen Kuhl , Alzheimer’s Disease Neuroimaging Initiative
{"title":"Two for tau: Automated model discovery reveals two-stage tau aggregation dynamics in Alzheimer’s disease","authors":"Charles A. Stockman ,&nbsp;Alain Goriely ,&nbsp;Ellen Kuhl ,&nbsp;Alzheimer’s Disease Neuroimaging Initiative","doi":"10.1016/j.brain.2024.100103","DOIUrl":null,"url":null,"abstract":"<div><div>Alzheimer’s disease is a neurodegenerative disorder characterized by the presence of amyloid-<span><math><mi>β</mi></math></span> plaques and the accumulation of misfolded tau proteins and neurofibrillary tangles in the brain. A thorough understanding of the local accumulation of tau is critical to develop effective therapeutic strategies. Tau pathology has traditionally been described using reaction–diffusion models, which succeed in capturing the global spread, but fail to accurately describe the local aggregation dynamics. Current mathematical models enforce a single-peak behavior in tau aggregation, which does not align well with clinical observations. Here we identify a more accurate description of tau aggregation that reflects the complex patterns observed in patients. We propose an innovative approach that uses constitutive neural networks to autonomously discover bell-shaped aggregation functions with multiple peaks from clinical positron emission tomography (PET) data of misfolded tau protein. Our method reveals previously overlooked two-stage aggregation dynamics by uncovering a two-term ordinary differential equation that links the local accumulation rate to the tau concentration. When trained on data from amyloid-<span><math><mi>β</mi></math></span> positive and negative subjects, the neural network clearly distinguishes between both groups and uncovers a more subtle relationship between amyloid-<span><math><mi>β</mi></math></span> and tau than previously postulated. In line with the amyloid–tau dual pathway hypothesis, our results show that the presence of toxic amyloid-<span><math><mi>β</mi></math></span> influences the accumulation of tau, particularly in the earlier disease stages. We expect that our approach to autonomously discover the accumulation dynamics of pathological proteins will improve simulations of tau dynamics in Alzheimer’s disease and provide new insights into disease progression.</div><div><strong>Significance Statement</strong></div><div>In Alzheimer’s disease, understanding the local dynamics of tau protein aggregation is crucial for developing effective treatments. Traditional models for tau protein dynamics use reaction–diffusion models that fail to accurately capture these local patterns. Our study introduces a novel approach that leverages constitutive neural networks to autonomously discover the complex, multi-peak aggregation dynamics from clinical PET data. This method reveals a previously overlooked two-stage tau accumulation process and a nuanced relationship between amyloid-<span><math><mi>β</mi></math></span> and tau. By distinguishing between amyloid-<span><math><mi>β</mi></math></span> positive and negative subjects, our model supports the amyloid–tau dual pathway hypothesis and offers novel insights into tau protein aggregation that have the potent to advance our understanding of Alzheimer’s disease progression.</div></div>","PeriodicalId":72449,"journal":{"name":"Brain multiphysics","volume":"7 ","pages":"Article 100103"},"PeriodicalIF":0.0000,"publicationDate":"2024-11-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Brain multiphysics","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S2666522024000145","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"Engineering","Score":null,"Total":0}
引用次数: 0

Abstract

Alzheimer’s disease is a neurodegenerative disorder characterized by the presence of amyloid-β plaques and the accumulation of misfolded tau proteins and neurofibrillary tangles in the brain. A thorough understanding of the local accumulation of tau is critical to develop effective therapeutic strategies. Tau pathology has traditionally been described using reaction–diffusion models, which succeed in capturing the global spread, but fail to accurately describe the local aggregation dynamics. Current mathematical models enforce a single-peak behavior in tau aggregation, which does not align well with clinical observations. Here we identify a more accurate description of tau aggregation that reflects the complex patterns observed in patients. We propose an innovative approach that uses constitutive neural networks to autonomously discover bell-shaped aggregation functions with multiple peaks from clinical positron emission tomography (PET) data of misfolded tau protein. Our method reveals previously overlooked two-stage aggregation dynamics by uncovering a two-term ordinary differential equation that links the local accumulation rate to the tau concentration. When trained on data from amyloid-β positive and negative subjects, the neural network clearly distinguishes between both groups and uncovers a more subtle relationship between amyloid-β and tau than previously postulated. In line with the amyloid–tau dual pathway hypothesis, our results show that the presence of toxic amyloid-β influences the accumulation of tau, particularly in the earlier disease stages. We expect that our approach to autonomously discover the accumulation dynamics of pathological proteins will improve simulations of tau dynamics in Alzheimer’s disease and provide new insights into disease progression.
Significance Statement
In Alzheimer’s disease, understanding the local dynamics of tau protein aggregation is crucial for developing effective treatments. Traditional models for tau protein dynamics use reaction–diffusion models that fail to accurately capture these local patterns. Our study introduces a novel approach that leverages constitutive neural networks to autonomously discover the complex, multi-peak aggregation dynamics from clinical PET data. This method reveals a previously overlooked two-stage tau accumulation process and a nuanced relationship between amyloid-β and tau. By distinguishing between amyloid-β positive and negative subjects, our model supports the amyloid–tau dual pathway hypothesis and offers novel insights into tau protein aggregation that have the potent to advance our understanding of Alzheimer’s disease progression.
两个 tau:自动模型发现揭示了阿尔茨海默病的两阶段 tau 聚集动力学
阿尔茨海默氏症是一种神经退行性疾病,其特征是大脑中存在淀粉样β斑块以及折叠错误的 tau 蛋白和神经纤维缠结的积累。透彻了解 tau 蛋白的局部积聚对于制定有效的治疗策略至关重要。传统上,人们使用反应扩散模型来描述 Tau 病理学,这种模型能成功捕捉全球扩散,但却无法准确描述局部聚集动态。目前的数学模型在 Tau 聚集中强制执行单峰行为,这与临床观察结果不符。在此,我们确定了一种更准确的 tau 聚集描述方法,它能反映在患者身上观察到的复杂模式。我们提出了一种创新方法,利用构成神经网络从折叠错误的 tau 蛋白的临床正电子发射断层扫描(PET)数据中自主发现具有多个峰值的钟形聚集函数。我们的方法揭示了以前被忽视的两阶段聚集动力学,发现了一个将局部积累率与 tau 蛋白浓度联系起来的双项常微分方程。在对淀粉样蛋白-β阳性和阴性受试者的数据进行训练时,神经网络能清楚地区分这两个组别,并揭示出淀粉样蛋白-β和tau之间比以前推测的更微妙的关系。与淀粉样蛋白-tau 双通道假说一致,我们的研究结果表明,毒性淀粉样蛋白-β的存在会影响 tau 的积累,尤其是在疾病的早期阶段。我们预计,我们自主发现病理蛋白积累动态的方法将改善对阿尔茨海默氏症中tau动态的模拟,并为疾病进展提供新的见解。传统的 tau 蛋白动态模型使用的是反应扩散模型,无法准确捕捉这些局部模式。我们的研究引入了一种新方法,利用组成神经网络从临床 PET 数据中自主发现复杂的多峰聚集动态。这种方法揭示了以前被忽视的两阶段 tau 积累过程以及淀粉样蛋白-β 和 tau 之间的微妙关系。通过区分淀粉样蛋白-β阳性和阴性受试者,我们的模型支持了淀粉样蛋白-tau双通道假说,并提供了对tau蛋白聚集的新见解,这些见解有望促进我们对阿尔茨海默病进展的理解。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Brain multiphysics
Brain multiphysics Physics and Astronomy (General), Modelling and Simulation, Neuroscience (General), Biomedical Engineering
CiteScore
4.80
自引率
0.00%
发文量
0
审稿时长
68 days
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信