The 2024 “Hacking Limnology” Workshop Series and Virtual Summit: Increasing Inclusion, Participation, and Representation in the Aquatic Sciences

Michael F. Meyer, Robert T. Hensley, Carolina C. Barbosa, Jonathan J. Borrelli, Johannes Feldbauer, Merritt E. Harlan, Burak Kuyumcu, Robert Ladwig, Jorrit P. Mesman, Rachel M. Pilla, Qing Zhan, Jacob A. Zwart, Ana I. Ayala, Craig B. Brinkerhoff, David Kneis, Daniel Mercado-Bettín, Cassandra Nickles, Donald C. Pierson, Patch Thongthaisong, Inne Vanderkelen
{"title":"The 2024 “Hacking Limnology” Workshop Series and Virtual Summit: Increasing Inclusion, Participation, and Representation in the Aquatic Sciences","authors":"Michael F. Meyer,&nbsp;Robert T. Hensley,&nbsp;Carolina C. Barbosa,&nbsp;Jonathan J. Borrelli,&nbsp;Johannes Feldbauer,&nbsp;Merritt E. Harlan,&nbsp;Burak Kuyumcu,&nbsp;Robert Ladwig,&nbsp;Jorrit P. Mesman,&nbsp;Rachel M. Pilla,&nbsp;Qing Zhan,&nbsp;Jacob A. Zwart,&nbsp;Ana I. Ayala,&nbsp;Craig B. Brinkerhoff,&nbsp;David Kneis,&nbsp;Daniel Mercado-Bettín,&nbsp;Cassandra Nickles,&nbsp;Donald C. Pierson,&nbsp;Patch Thongthaisong,&nbsp;Inne Vanderkelen","doi":"10.1002/lob.10672","DOIUrl":null,"url":null,"abstract":"<p>The 4<sup>th</sup> Aquatic Ecosystem MOdeling Network—Junior (AEMON-J) Hacking Limnology Workshop and 5<sup>th</sup> Virtual Summit: Incorporating Data Science and Open Science in the Aquatic Sciences (DSOS) convened 15–19 July 2024. During the week, these joint communities engaged in activities at the intersection of big data, open science, modeling, remote sensing, and the aquatic sciences. The weeklong event, with over 100 aquatic science practitioners and enthusiasts, followed a similar structure to previous years, comprising three days of workshops followed by two days of the virtual summit (Meyer and Zwart <span>2020</span>; Meyer et al. <span>2021b</span>, <span>2022</span>, <span>2023</span>).</p><p>As in previous years, accessibility for a global audience was a top priority. Both events had no registration fees, thereby enabling broad participation. All recordings and workshop materials were made freely available on the Open Science Framework (OSF) archive (Meyer et al. <span>2021a</span>) (https://osf.io/682v5/) for asynchronous viewing and access following the event. Relative to the 60 countries represented annually in the 2021, 2022, and 2023 workshops and summits (Meyer et al. <span>2021b</span>, <span>2022</span>, <span>2023</span>), the 2024 workshop and summit experienced an expansion in global representation, with the majority of registrants from newly represented countries such as Nepal and Colombia. All registrants together represented more than 70 countries. With over 600 registrants worldwide, the most represented countries included the United States (30.5% of registrants), Nigeria (10.9%), Canada (9.1%), Germany (5.8%), and Nepal (4.5%). Notably, the 2024 Workshops and Summit had the lowest proportional representation from the United States in comparison to the previous summits (Fig. 1) and was the first year with two countries in Asia being in the top 10 based on the number of registrants (Nepal and India; Table 1). With respect to career-stage, most participants identified as being in early-career positions (i.e., graduate students and post-doctoral researchers; ~50%), as in previous years (Meyer et al. <span>2023</span>).</p><p>This year's “Hacking Limnology” Workshop series featured three consecutive days of workshops. For each day, the workshop included a short, prerecorded introduction that attendees could watch prior to attending, a 45-minute keynote talk followed by a live question-and-answer session, two hours for the hands-on workshop portion, and finally one hour of breakout and working groups to discuss next steps and potential collaborations. All three workshops allowed for hands-on coding; the first and third workshops were in R (R Core Team <span>2024</span>), and the second was in Python (Python Software Foundation <span>2024</span>). The workshops were recorded so they could be watched asynchronously by the large number of international attendees living in different time zones. Following the workshops, all introductory materials, keynote talks, scripts, and workshop recordings were made publicly available on the OSF archive (Meyer et al. <span>2021a</span>) (https://osf.io/682v5/).</p><p>The focus of the first workshop was the Inter-Sectoral Impact Model Intercomparison Project (ISIMIP). ISIMIP is an international modeling initiative that quantifies climate change impacts using earth system models across different sectors and spatial scales, that is, lakes, under different climate change scenarios (Golub et al. <span>2022</span>). The second workshop centered around remote sensing data from the Surface Water Ocean Topography (SWOT) satellite (Biancamaria et al. <span>2016</span>). The third workshop focused on Ordinary Differential Equation-based ecological modeling using the “rodeo” R package (Kneis et al. <span>2017</span>). Each day of the workshop was well attended (up to 110 people), and engagement remained high throughout each day. Several people participated in the postworkshop breakout and working group meetings as well.</p><p>Because DSOS operated independently for one year prior to joining forces with AEMON-J, the 2024 Virtual Summit marks the fifth year of DSOS Virtual Summits. As in previous years, the summit consisted of a wide range of presenters, including sessions related to big data, data-intensive models, climate change, and applications of open science. Each session consisted of three to four presenters, where each presenter prepared a 10-minute, prerecorded video of their presentation, which was streamed live during the summit. Presentations spanned a range of topics, including building crowdsourced zooplankton datasets, forecasting ecosystem function over a range of climate scenarios, creating accessible data visualizations for wide audiences, and organizing grassroots communities for expanding open science. As with previous summits, all question-and-answer sessions were live following the streaming of all presentations, where questions were submitted in a written format and presenters could access the questions in real time for better preparation. Questions and answers revolved around a suite of themes, including how to avoid “parachute science” (Barber et al. <span>2014</span>), how to develop grassroots data harmonization efforts, and how to best work with complex spatiotemporal datasets for modeling purposes.</p><p>In addition to recorded scientific presentations, the summit also hosted a career panel. This year's panel focused on career paths in industry settings, with panelists from corporations, consulting companies, and start-ups. Panelists included Kate Fickas (Esri), Arik Tashie (ClimateAI), Kateri Salk (TetraTech), Leslie Smith (Your Ocean Consulting, LLC), and Tung Nguyen (Jacobs Solutions, Inc). In their discussion, many of the panelists focused on translating science products into a portfolio that could be shared and presented to a range of industry settings. Moreover, panelists emphasized the pervasiveness of imposter syndrome, the need to recognize differences in “experience thresholds” across job sectors, and the importance of marketing your skills to hiring managers.</p><p>As with years prior, the 2024 “Hacking Limnology” Workshops and Virtual Summit attracted wide attention from researchers across various career stages, experiences, and locations. Though the format was comparable to previous events, the content has expanded to more inclusively represent the researchers and themes in the nexus of data science, open science, and the aquatic sciences. The ever-popular remote sensing content has expanded from optical to radar and altimetry remote sensing. Big data conversations have expanded from -omics and high-frequency monitoring to include community composition and function databases. Numerical modeling efforts upscaled from local site studies to global climate change assessments. Discussions of career trajectories in data science and open science have arced across a spectrum from academia to government to industry settings. In short, the past 4 years of workshops and 5 year of summits have remained as dynamic as the science that they communicate, and the representation of presenters, panelists, and organizational team members has likewise expanded to showcase and connect the diversity of people engaging in this science (Tables 2 and 3).</p><p>The fourth joint “Hacking Limnology” Workshop Series and DSOS Virtual Summit also provided an opportunity to look back on the successes and challenges of the prior half decade of summits. Meyer and Zwart (<span>2020</span>) highlighted how the inaugural Virtual Summit created an opportunity for a wide community to participate and network in the data-intensive aquatic sciences but had definite needs for improvement in speaker representation. Although an ever-increasing ease in conducting science virtually has enabled for the summits to run more smoothly, the most noticeable improvement for the summits has been the representation of speakers and those involved in the community. Although the first summit strove for diverse representation, the finalized speaker list fell short of those goals. Meyer and Zwart (<span>2020</span>) suggested that more diverse speaker representation could be achieved through inviting speakers further in advance of the summit, creating opportunities for panels, and intentionally focusing on soliciting speakers from a range of backgrounds. Since 2020, the workshops and summits have grown to include speakers and organizers of numerous backgrounds, identities, and experiences (Tables 2 and 3). Likely as a result of our intentional focus on increasing representation, the reach of AEMON-J and DSOS beyond a primarily North American audience has also grown. Although earlier summits had higher synchronous participation (~120–160 people), the previous 3 years have maintained high registration (457–684 people) and synchronous attendance (40–140 people). While opportunity abounds to improve on these foundations, the organizing team is enthusiastic about the overwhelming positive responses the workshops and summits have received.</p><p>With the growth of data-intensive aquatic science, the organizational team is confident that we have identified a needed space where modelers from numerical, machine learning, and statistical backgrounds can converge, discuss, and share experiences centered on data science and open science topics (Meyer and Zwart <span>2020</span>). The scale, scope, pace, and dynamism of this workshop and virtual summit are reflections of the interest in this nexus, and we look forward to seeing how it grows in the future.</p><p>Michael F. Meyer is an associate editor at <i>Limnology &amp; Oceanography Bulletin</i>. Carolina C. 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引用次数: 0

Abstract

The 4th Aquatic Ecosystem MOdeling Network—Junior (AEMON-J) Hacking Limnology Workshop and 5th Virtual Summit: Incorporating Data Science and Open Science in the Aquatic Sciences (DSOS) convened 15–19 July 2024. During the week, these joint communities engaged in activities at the intersection of big data, open science, modeling, remote sensing, and the aquatic sciences. The weeklong event, with over 100 aquatic science practitioners and enthusiasts, followed a similar structure to previous years, comprising three days of workshops followed by two days of the virtual summit (Meyer and Zwart 2020; Meyer et al. 2021b, 2022, 2023).

As in previous years, accessibility for a global audience was a top priority. Both events had no registration fees, thereby enabling broad participation. All recordings and workshop materials were made freely available on the Open Science Framework (OSF) archive (Meyer et al. 2021a) (https://osf.io/682v5/) for asynchronous viewing and access following the event. Relative to the 60 countries represented annually in the 2021, 2022, and 2023 workshops and summits (Meyer et al. 2021b, 2022, 2023), the 2024 workshop and summit experienced an expansion in global representation, with the majority of registrants from newly represented countries such as Nepal and Colombia. All registrants together represented more than 70 countries. With over 600 registrants worldwide, the most represented countries included the United States (30.5% of registrants), Nigeria (10.9%), Canada (9.1%), Germany (5.8%), and Nepal (4.5%). Notably, the 2024 Workshops and Summit had the lowest proportional representation from the United States in comparison to the previous summits (Fig. 1) and was the first year with two countries in Asia being in the top 10 based on the number of registrants (Nepal and India; Table 1). With respect to career-stage, most participants identified as being in early-career positions (i.e., graduate students and post-doctoral researchers; ~50%), as in previous years (Meyer et al. 2023).

This year's “Hacking Limnology” Workshop series featured three consecutive days of workshops. For each day, the workshop included a short, prerecorded introduction that attendees could watch prior to attending, a 45-minute keynote talk followed by a live question-and-answer session, two hours for the hands-on workshop portion, and finally one hour of breakout and working groups to discuss next steps and potential collaborations. All three workshops allowed for hands-on coding; the first and third workshops were in R (R Core Team 2024), and the second was in Python (Python Software Foundation 2024). The workshops were recorded so they could be watched asynchronously by the large number of international attendees living in different time zones. Following the workshops, all introductory materials, keynote talks, scripts, and workshop recordings were made publicly available on the OSF archive (Meyer et al. 2021a) (https://osf.io/682v5/).

The focus of the first workshop was the Inter-Sectoral Impact Model Intercomparison Project (ISIMIP). ISIMIP is an international modeling initiative that quantifies climate change impacts using earth system models across different sectors and spatial scales, that is, lakes, under different climate change scenarios (Golub et al. 2022). The second workshop centered around remote sensing data from the Surface Water Ocean Topography (SWOT) satellite (Biancamaria et al. 2016). The third workshop focused on Ordinary Differential Equation-based ecological modeling using the “rodeo” R package (Kneis et al. 2017). Each day of the workshop was well attended (up to 110 people), and engagement remained high throughout each day. Several people participated in the postworkshop breakout and working group meetings as well.

Because DSOS operated independently for one year prior to joining forces with AEMON-J, the 2024 Virtual Summit marks the fifth year of DSOS Virtual Summits. As in previous years, the summit consisted of a wide range of presenters, including sessions related to big data, data-intensive models, climate change, and applications of open science. Each session consisted of three to four presenters, where each presenter prepared a 10-minute, prerecorded video of their presentation, which was streamed live during the summit. Presentations spanned a range of topics, including building crowdsourced zooplankton datasets, forecasting ecosystem function over a range of climate scenarios, creating accessible data visualizations for wide audiences, and organizing grassroots communities for expanding open science. As with previous summits, all question-and-answer sessions were live following the streaming of all presentations, where questions were submitted in a written format and presenters could access the questions in real time for better preparation. Questions and answers revolved around a suite of themes, including how to avoid “parachute science” (Barber et al. 2014), how to develop grassroots data harmonization efforts, and how to best work with complex spatiotemporal datasets for modeling purposes.

In addition to recorded scientific presentations, the summit also hosted a career panel. This year's panel focused on career paths in industry settings, with panelists from corporations, consulting companies, and start-ups. Panelists included Kate Fickas (Esri), Arik Tashie (ClimateAI), Kateri Salk (TetraTech), Leslie Smith (Your Ocean Consulting, LLC), and Tung Nguyen (Jacobs Solutions, Inc). In their discussion, many of the panelists focused on translating science products into a portfolio that could be shared and presented to a range of industry settings. Moreover, panelists emphasized the pervasiveness of imposter syndrome, the need to recognize differences in “experience thresholds” across job sectors, and the importance of marketing your skills to hiring managers.

As with years prior, the 2024 “Hacking Limnology” Workshops and Virtual Summit attracted wide attention from researchers across various career stages, experiences, and locations. Though the format was comparable to previous events, the content has expanded to more inclusively represent the researchers and themes in the nexus of data science, open science, and the aquatic sciences. The ever-popular remote sensing content has expanded from optical to radar and altimetry remote sensing. Big data conversations have expanded from -omics and high-frequency monitoring to include community composition and function databases. Numerical modeling efforts upscaled from local site studies to global climate change assessments. Discussions of career trajectories in data science and open science have arced across a spectrum from academia to government to industry settings. In short, the past 4 years of workshops and 5 year of summits have remained as dynamic as the science that they communicate, and the representation of presenters, panelists, and organizational team members has likewise expanded to showcase and connect the diversity of people engaging in this science (Tables 2 and 3).

The fourth joint “Hacking Limnology” Workshop Series and DSOS Virtual Summit also provided an opportunity to look back on the successes and challenges of the prior half decade of summits. Meyer and Zwart (2020) highlighted how the inaugural Virtual Summit created an opportunity for a wide community to participate and network in the data-intensive aquatic sciences but had definite needs for improvement in speaker representation. Although an ever-increasing ease in conducting science virtually has enabled for the summits to run more smoothly, the most noticeable improvement for the summits has been the representation of speakers and those involved in the community. Although the first summit strove for diverse representation, the finalized speaker list fell short of those goals. Meyer and Zwart (2020) suggested that more diverse speaker representation could be achieved through inviting speakers further in advance of the summit, creating opportunities for panels, and intentionally focusing on soliciting speakers from a range of backgrounds. Since 2020, the workshops and summits have grown to include speakers and organizers of numerous backgrounds, identities, and experiences (Tables 2 and 3). Likely as a result of our intentional focus on increasing representation, the reach of AEMON-J and DSOS beyond a primarily North American audience has also grown. Although earlier summits had higher synchronous participation (~120–160 people), the previous 3 years have maintained high registration (457–684 people) and synchronous attendance (40–140 people). While opportunity abounds to improve on these foundations, the organizing team is enthusiastic about the overwhelming positive responses the workshops and summits have received.

With the growth of data-intensive aquatic science, the organizational team is confident that we have identified a needed space where modelers from numerical, machine learning, and statistical backgrounds can converge, discuss, and share experiences centered on data science and open science topics (Meyer and Zwart 2020). The scale, scope, pace, and dynamism of this workshop and virtual summit are reflections of the interest in this nexus, and we look forward to seeing how it grows in the future.

Michael F. Meyer is an associate editor at Limnology & Oceanography Bulletin. Carolina C. Barbosa is a former associate editor at Limnology & Oceanography Bulletin.

Abstract Image

2024 年 "破解湖沼学 "系列研讨会和虚拟峰会:提高水产科学的包容性、参与性和代表性
第四届水生生态系统模拟网络-青少年(AEMON-J)黑客湖泊学研讨会暨第五届虚拟峰会:在 2024 年 7 月 15-19 日召开。在为期一周的时间里,这些联合社区参与了大数据、开放科学、建模、遥感和水产科学交叉领域的活动。这次为期一周的活动有 100 多名水产科学从业人员和爱好者参加,活动结构与往年类似,包括三天研讨会和两天虚拟峰会(Meyer 和 Zwart,2020 年;Meyer 等,2021b、2022、2023 年)。与往年一样,全球受众的可及性是重中之重。两项活动均不收取注册费,从而使广泛参与成为可能。所有录音和研讨会材料均可在开放科学框架(OSF)档案(Meyer et al. 2021a)(https://osf.io/682v5/)上免费获取,以便在活动结束后进行异步观看和访问。与 2021 年、2022 年和 2023 年每年参加研讨会和峰会的 60 个国家相比(Meyer 等人,2021b、2022、2023 年),2024 年研讨会和峰会的全球代表人数有所增加,大多数注册者来自尼泊尔和哥伦比亚等新代表国家。所有注册者共代表 70 多个国家。在全球 600 多名注册者中,最具代表性的国家包括美国(占注册者的 30.5%)、尼日利亚(10.9%)、加拿大(9.1%)、德国(5.8%)和尼泊尔(4.5%)。值得注意的是,与前几届峰会相比,2024 年讲习班和峰会的美国代表比例最低(图 1),并且是第一次有两个亚洲国家(尼泊尔和印度;表 1)根据注册人数进入前十名。在职业阶段方面,与往年一样,大多数与会者认为自己处于职业生涯初期(即研究生和博士后研究人员;约占50%)(Meyer等人,2023年)。每天的研讨会都包括一个简短的预录介绍(与会者可在参加前观看)、一个 45 分钟的主题演讲(随后是现场问答环节)、两个小时的实践研讨会部分,以及最后一个小时的分组讨论和工作小组讨论,以讨论下一步措施和潜在合作。三场研讨会都允许动手编码;第一场和第三场研讨会使用的是 R 语言(R 核心小组 2024),第二场使用的是 Python 语言(Python 软件基金会 2024)。研讨会进行了录制,以便生活在不同时区的众多国际与会者可以异步观看。研讨会结束后,所有介绍材料、主题演讲、脚本和研讨会录音都在 OSF 档案库(Meyer 等人,2021a)(https://osf.io/682v5/)上公开发布。第一次研讨会的重点是部门间影响模型相互比较项目(ISIMIP)。ISIMIP 是一项国际建模计划,在不同的气候变化情景下,利用地球系统模型对不同部门和空间尺度(即湖泊)的气候变化影响进行量化(Golub 等,2022 年)。第二场研讨会围绕地表水海洋地形(SWOT)卫星的遥感数据展开(Biancamaria 等,2016 年)。第三场研讨会的重点是使用 "rodeo "R 软件包进行基于常微分方程的生态建模(Kneis 等,2017 年)。每天的研讨会都有很多人参加(多达 110 人),而且每天的参与度都很高。由于 DSOS 在与 AEMON-J 联合之前独立运作了一年,2024 年的虚拟峰会标志着 DSOS 虚拟峰会进入了第五个年头。与往年一样,本次峰会由众多演讲者组成,包括与大数据、数据密集型模型、气候变化和开放科学应用相关的会议。每场会议由三到四位演讲者组成,每位演讲者都准备了一段 10 分钟的演讲视频,在峰会期间进行现场直播。演讲主题范围广泛,包括建立众包浮游动物数据集、预测各种气候情景下的生态系统功能、为广大受众创建可访问的可视化数据,以及组织基层社区扩大开放科学。与前几届峰会一样,所有问答环节都是在所有演讲流媒体播放之后进行的,演讲者以书面形式提交问题,演讲者可以实时获取问题,以便更好地做准备。问答围绕一系列主题展开,包括如何避免 "空降科学"(Barber et al. 除了有记录的科学报告,峰会还举办了一个职业专题讨论会。今年的专题讨论会重点讨论了在行业环境中的职业发展道路,与会专家来自企业、咨询公司和初创公司。小组成员包括 Kate Fickas(Esri)、Arik Tashie(ClimateAI)、Kateri Salk(TetraTech)、Leslie Smith(Your Ocean Consulting, LLC)和 Tung Nguyen(Jacobs Solutions, Inc)。在讨论中,许多小组成员重点关注如何将科学产品转化为可在各种行业环境中共享和展示的产品组合。此外,小组成员还强调了 "冒名顶替综合症 "的普遍性、认识到不同工作领域 "经验门槛 "差异的必要性以及向招聘经理推销自己技能的重要性。虽然活动形式与往年类似,但内容有所扩展,更能代表数据科学、开放科学和水产科学领域的研究人员和主题。广受欢迎的遥感内容已从光学遥感扩展到雷达和测高遥感。大数据对话从组学和高频监测扩展到群落组成和功能数据库。数值建模工作从本地站点研究扩展到全球气候变化评估。关于数据科学和开放科学领域职业发展轨迹的讨论已经跨越了从学术界到政府再到产业界的各个领域。总之,过去 4 年的研讨会和 5 年的峰会与它们所传播的科学一样充满活力,演讲者、小组成员和组织团队成员的代表性也同样得到了扩展,以展示和连接从事这一科学的人员的多样性(表 2 和表 3)。Meyer 和 Zwart(2020 年)强调了首届虚拟峰会如何为广大社区参与数据密集型水生科学并建立联系创造了机会,但在发言人的代表性方面确实需要改进。尽管通过虚拟方式进行科学研究越来越容易,使峰会能够更顺利地进行,但峰会最明显的改进是发言人和社区参与者的代表性。虽然首届峰会力求实现多元化的代表性,但最终确定的演讲者名单并未实现这些目标。Meyer 和 Zwart(2020 年)建议,可以通过在峰会前进一步邀请演讲者、创造小组讨论的机会以及有意识地重点邀请不同背景的演讲者来实现演讲者代表的多元化。自 2020 年以来,工作坊和峰会的发言人和组织者已经增加到了不同的背景、身份和经历(表 2 和表 3)。可能是由于我们有意识地关注增加代表性,AEMON-J 和 DSOS 的影响力也在不断扩大,不再局限于主要是北美地区的受众。虽然早期峰会的同步参与人数较多(约 120-160 人),但前三年的注册人数(457-684 人)和同步出席人数(40-140 人)都保持在较高水平。随着数据密集型水产科学的发展,组织团队确信,我们已经找到了一个所需的空间,来自数值、机器学习和统计背景的建模人员可以汇聚一堂,围绕数据科学和开放科学主题展开讨论并分享经验(Meyer 和 Zwart,2020 年)。本次研讨会和虚拟峰会的规模、范围、速度和活力反映了人们对这一联系的兴趣,我们期待看到它在未来如何发展。Carolina C. Barbosa 曾任《湖沼学与amp; 海洋学公报》副主编。
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来源期刊
Limnology and Oceanography Bulletin
Limnology and Oceanography Bulletin Environmental Science-Water Science and Technology
CiteScore
1.50
自引率
0.00%
发文量
60
期刊介绍: All past issues of the Limnology and Oceanography Bulletin are available online, including its predecessors Communications to Members and the ASLO Bulletin. Access to the current and previous volume is restricted to members and institutions with a subscription to the ASLO journals. All other issues are freely accessible without a subscription. As part of ASLO’s mission to disseminate and communicate knowledge in the aquatic sciences.
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