SDR2Tr-GAN: A Novel Medical Image Fusion Pipeline Based on GAN With SDR2 Module and Transformer Optimization Strategy

IF 3 4区 计算机科学 Q2 ENGINEERING, ELECTRICAL & ELECTRONIC
Ying Cheng, Xianjin Fang, Zhiri Tang, Zekuan Yu, Linlin Sun, Li Zhu
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引用次数: 0

Abstract

In clinical practice, radiologists diagnose brain tumors with the help of different magnetic resonance imaging (MRI) sequences and judge the type and grade of brain tumors. It is hard to realize the brain tumor computer-aided diagnosis system only with a single MRI sequence. However, the existing multiple MRI sequence fusion methods have limitations in the enhancement of tumor details. To improve fusion details of multi-modality MRI images, a novel conditional generative adversarial fusion network based on three discriminators and a Staggered Dense Residual2 (SDR2) module, named SDR2Tr-GAN, was proposed in this paper. In the SDR2Tr-GAN network pipeline, the generator consists of an encoder, decoder, and fusion strategy that can enhance the feature representation. SDR2 module is developed with Res2Net into the encoder to extract multi-scale features. In addition, a Multi-Head Spatial/Channel Attention Transformer, as a fusion strategy to strengthen the long-range dependencies of global context information, is integrated into our pipeline. A Mask-based constraint as a novel fusion optimization mechanism was designed, focusing on enhancing salient feature details. The Mask-based constraint utilizes the segmentation mask obtained by the pre-trained Unet and Ground Truth to optimize the training process. Meanwhile, MI and SSIM loss jointly improve the visual perception of images. Extensive experiments were conducted on the public BraTS2021 dataset. The visual and quantitative results demonstrate that the proposed method can simultaneously enhance both global image quality and local texture details in multi-modality MRI images. Besides, our SDR2Tr-GAN outperforms the other state-of-the-art fusion methods regarding subjective and objective evaluation.

SDR2Tr-GAN:基于带有 SDR2 模块和变压器优化策略的 GAN 的新型医学图像融合管道
在临床实践中,放射科医生借助不同的磁共振成像(MRI)序列诊断脑肿瘤,并判断脑肿瘤的类型和分级。仅靠单一磁共振成像序列很难实现脑肿瘤计算机辅助诊断系统。然而,现有的多核磁共振成像序列融合方法在增强肿瘤细节方面存在局限性。为了改善多模态磁共振成像的融合细节,本文提出了一种基于三个判别器和交错密集残差2(SDR2)模块的新型条件生成对抗融合网络,命名为 SDR2Tr-GAN。在 SDR2Tr-GAN 网络管道中,生成器由编码器、解码器和可增强特征表示的融合策略组成。在编码器中开发了 SDR2 模块和 Res2Net,以提取多尺度特征。此外,我们还在管道中集成了多头空间/信道注意力转换器,作为加强全局上下文信息长距离依赖性的融合策略。我们设计了一种基于掩码的约束机制,作为一种新颖的融合优化机制,重点在于增强突出的特征细节。基于掩码的约束利用预训练 Unet 和地面实况获得的分割掩码来优化训练过程。同时,MI 和 SSIM loss 可共同改善图像的视觉感知。在公开的 BraTS2021 数据集上进行了广泛的实验。视觉和定量结果表明,所提出的方法可以同时提高多模态磁共振成像的整体图像质量和局部纹理细节。此外,在主观和客观评价方面,我们的 SDR2Tr-GAN 优于其他最先进的融合方法。
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来源期刊
International Journal of Imaging Systems and Technology
International Journal of Imaging Systems and Technology 工程技术-成像科学与照相技术
CiteScore
6.90
自引率
6.10%
发文量
138
审稿时长
3 months
期刊介绍: The International Journal of Imaging Systems and Technology (IMA) is a forum for the exchange of ideas and results relevant to imaging systems, including imaging physics and informatics. The journal covers all imaging modalities in humans and animals. IMA accepts technically sound and scientifically rigorous research in the interdisciplinary field of imaging, including relevant algorithmic research and hardware and software development, and their applications relevant to medical research. The journal provides a platform to publish original research in structural and functional imaging. The journal is also open to imaging studies of the human body and on animals that describe novel diagnostic imaging and analyses methods. Technical, theoretical, and clinical research in both normal and clinical populations is encouraged. Submissions describing methods, software, databases, replication studies as well as negative results are also considered. The scope of the journal includes, but is not limited to, the following in the context of biomedical research: Imaging and neuro-imaging modalities: structural MRI, functional MRI, PET, SPECT, CT, ultrasound, EEG, MEG, NIRS etc.; Neuromodulation and brain stimulation techniques such as TMS and tDCS; Software and hardware for imaging, especially related to human and animal health; Image segmentation in normal and clinical populations; Pattern analysis and classification using machine learning techniques; Computational modeling and analysis; Brain connectivity and connectomics; Systems-level characterization of brain function; Neural networks and neurorobotics; Computer vision, based on human/animal physiology; Brain-computer interface (BCI) technology; Big data, databasing and data mining.
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