Nikolas Echeverri, Jose Dario Perea, Salvador Leon
{"title":"Exploring Electronic and Conformational Attributes of an Organic Donor-Bridge-Acceptor Molecular System","authors":"Nikolas Echeverri, Jose Dario Perea, Salvador Leon","doi":"10.1002/adts.202301212","DOIUrl":null,"url":null,"abstract":"This research explores the electronic properties and conformational dynamics of the ZnP-COPV-<span data-altimg=\"/cms/asset/0c20fd31-fb7b-48b3-a778-9444ef387a5e/adts202301212-math-0002.png\"></span><mjx-container ctxtmenu_counter=\"55\" ctxtmenu_oldtabindex=\"1\" jax=\"CHTML\" role=\"application\" sre-explorer- style=\"font-size: 103%; position: relative;\" tabindex=\"0\"><mjx-math aria-hidden=\"true\" location=\"graphic/adts202301212-math-0002.png\"><mjx-semantics><mjx-msub data-semantic-children=\"0,1\" data-semantic- data-semantic-role=\"latinletter\" data-semantic-speech=\"normal upper C 60\" data-semantic-type=\"subscript\"><mjx-mi data-semantic-annotation=\"clearspeak:simple\" data-semantic-font=\"normal\" data-semantic- data-semantic-parent=\"2\" data-semantic-role=\"latinletter\" data-semantic-type=\"identifier\"><mjx-c></mjx-c></mjx-mi><mjx-script style=\"vertical-align: -0.15em;\"><mjx-mn data-semantic-annotation=\"clearspeak:simple\" data-semantic-font=\"normal\" data-semantic- data-semantic-parent=\"2\" data-semantic-role=\"integer\" data-semantic-type=\"number\" size=\"s\"><mjx-c></mjx-c><mjx-c></mjx-c></mjx-mn></mjx-script></mjx-msub></mjx-semantics></mjx-math><mjx-assistive-mml display=\"inline\" unselectable=\"on\"><math altimg=\"urn:x-wiley:25130390:media:adts202301212:adts202301212-math-0002\" display=\"inline\" location=\"graphic/adts202301212-math-0002.png\" xmlns=\"http://www.w3.org/1998/Math/MathML\"><semantics><msub data-semantic-=\"\" data-semantic-children=\"0,1\" data-semantic-role=\"latinletter\" data-semantic-speech=\"normal upper C 60\" data-semantic-type=\"subscript\"><mi data-semantic-=\"\" data-semantic-annotation=\"clearspeak:simple\" data-semantic-font=\"normal\" data-semantic-parent=\"2\" data-semantic-role=\"latinletter\" data-semantic-type=\"identifier\" mathvariant=\"normal\">C</mi><mn data-semantic-=\"\" data-semantic-annotation=\"clearspeak:simple\" data-semantic-font=\"normal\" data-semantic-parent=\"2\" data-semantic-role=\"integer\" data-semantic-type=\"number\">60</mn></msub>${\\rm C}_{60}$</annotation></semantics></math></mjx-assistive-mml></mjx-container> (Zinc Porphyrin - Carbon bridged Oligo Phenylenevinylene - Fullerene) organic semiconductor via specialized Density Functional Theory (DFT) and Molecular Dynamics (MD) computational techniques. First, through DFT calculations, essential HOMO (Highest Occupied Molecular Orbital), LUMO (Lowest Unoccupied Molecular Orbital), and Molecular Electrostatic Potential (MEP) electronic attributes are meticulously dissected providing insights into the intricate charge transfer processes between the constituent donor-acceptor moieties. Furthermore, MD simulations are employed to unveil the molecular system's multifaceted conformational flexibility and stability. The Root-mean-squared deviation (RMSD), end-to-end distance, and torsional angles quantitative analysis of conformational attributes support the carbon-bridged oligo-phenylenevinylene (COPV) molecular wire's <span data-altimg=\"/cms/asset/9eecd762-e922-46f9-adbc-1db07b50a5f7/adts202301212-math-0003.png\"></span><mjx-container ctxtmenu_counter=\"56\" ctxtmenu_oldtabindex=\"1\" jax=\"CHTML\" role=\"application\" sre-explorer- style=\"font-size: 103%; position: relative;\" tabindex=\"0\"><mjx-math aria-hidden=\"true\" location=\"graphic/adts202301212-math-0003.png\"><mjx-semantics><mjx-mi data-semantic-annotation=\"clearspeak:simple\" data-semantic-font=\"italic\" data-semantic- data-semantic-role=\"greekletter\" data-semantic-speech=\"pi\" data-semantic-type=\"identifier\"><mjx-c></mjx-c></mjx-mi></mjx-semantics></mjx-math><mjx-assistive-mml display=\"inline\" unselectable=\"on\"><math altimg=\"urn:x-wiley:25130390:media:adts202301212:adts202301212-math-0003\" display=\"inline\" location=\"graphic/adts202301212-math-0003.png\" xmlns=\"http://www.w3.org/1998/Math/MathML\"><semantics><mi data-semantic-=\"\" data-semantic-annotation=\"clearspeak:simple\" data-semantic-font=\"italic\" data-semantic-role=\"greekletter\" data-semantic-speech=\"pi\" data-semantic-type=\"identifier\">π</mi>$\\pi$</annotation></semantics></math></mjx-assistive-mml></mjx-container>-skeleton planar and rigid conformation. This minimal end-to-end distance variation (within <span data-altimg=\"/cms/asset/53245747-2f9a-49ac-ba06-47d8641cafed/adts202301212-math-0004.png\"></span><mjx-container ctxtmenu_counter=\"57\" ctxtmenu_oldtabindex=\"1\" jax=\"CHTML\" role=\"application\" sre-explorer- style=\"font-size: 103%; position: relative;\" tabindex=\"0\"><mjx-math aria-hidden=\"true\" location=\"graphic/adts202301212-math-0004.png\"><mjx-semantics><mjx-mrow data-semantic-children=\"1\" data-semantic-content=\"0\" data-semantic- data-semantic-role=\"addition\" data-semantic-speech=\"plus or minus 1\" data-semantic-type=\"prefixop\"><mjx-mo data-semantic- data-semantic-operator=\"prefixop,±\" data-semantic-parent=\"2\" data-semantic-role=\"addition\" data-semantic-type=\"operator\" rspace=\"1\" style=\"margin-left: 0.056em;\"><mjx-c></mjx-c></mjx-mo><mjx-mn data-semantic-annotation=\"clearspeak:simple\" data-semantic-font=\"normal\" data-semantic- data-semantic-parent=\"2\" data-semantic-role=\"integer\" data-semantic-type=\"number\"><mjx-c></mjx-c></mjx-mn></mjx-mrow></mjx-semantics></mjx-math><mjx-assistive-mml display=\"inline\" unselectable=\"on\"><math altimg=\"urn:x-wiley:25130390:media:adts202301212:adts202301212-math-0004\" display=\"inline\" location=\"graphic/adts202301212-math-0004.png\" xmlns=\"http://www.w3.org/1998/Math/MathML\"><semantics><mrow data-semantic-=\"\" data-semantic-children=\"1\" data-semantic-content=\"0\" data-semantic-role=\"addition\" data-semantic-speech=\"plus or minus 1\" data-semantic-type=\"prefixop\"><mo data-semantic-=\"\" data-semantic-operator=\"prefixop,±\" data-semantic-parent=\"2\" data-semantic-role=\"addition\" data-semantic-type=\"operator\">±</mo><mn data-semantic-=\"\" data-semantic-annotation=\"clearspeak:simple\" data-semantic-font=\"normal\" data-semantic-parent=\"2\" data-semantic-role=\"integer\" data-semantic-type=\"number\">1</mn></mrow>$\\pm 1$</annotation></semantics></math></mjx-assistive-mml></mjx-container> Å) compared to the initially extended structure and the constrained torsional motion (within <span data-altimg=\"/cms/asset/e76b61e2-9fb8-4bdc-8238-3706996a9814/adts202301212-math-0005.png\"></span><mjx-container ctxtmenu_counter=\"58\" ctxtmenu_oldtabindex=\"1\" jax=\"CHTML\" role=\"application\" sre-explorer- style=\"font-size: 103%; position: relative;\" tabindex=\"0\"><mjx-math aria-hidden=\"true\" location=\"graphic/adts202301212-math-0005.png\"><mjx-semantics><mjx-mrow data-semantic-children=\"3\" data-semantic-content=\"0\" data-semantic- data-semantic-role=\"addition\" data-semantic-speech=\"plus or minus 20 Superscript ring\" data-semantic-type=\"prefixop\"><mjx-mo data-semantic- data-semantic-operator=\"prefixop,±\" data-semantic-parent=\"4\" data-semantic-role=\"addition\" data-semantic-type=\"operator\" rspace=\"1\" style=\"margin-left: 0.056em;\"><mjx-c></mjx-c></mjx-mo><mjx-msup data-semantic-children=\"1,2\" data-semantic- data-semantic-parent=\"4\" data-semantic-role=\"integer\" data-semantic-type=\"superscript\"><mjx-mn data-semantic-annotation=\"clearspeak:simple\" data-semantic-font=\"normal\" data-semantic- data-semantic-parent=\"3\" data-semantic-role=\"integer\" data-semantic-type=\"number\"><mjx-c></mjx-c><mjx-c></mjx-c></mjx-mn><mjx-script style=\"vertical-align: 0.393em;\"><mjx-mo data-semantic- data-semantic-parent=\"3\" data-semantic-role=\"multiplication\" data-semantic-type=\"operator\" size=\"s\"><mjx-c></mjx-c></mjx-mo></mjx-script></mjx-msup></mjx-mrow></mjx-semantics></mjx-math><mjx-assistive-mml display=\"inline\" unselectable=\"on\"><math altimg=\"urn:x-wiley:25130390:media:adts202301212:adts202301212-math-0005\" display=\"inline\" location=\"graphic/adts202301212-math-0005.png\" xmlns=\"http://www.w3.org/1998/Math/MathML\"><semantics><mrow data-semantic-=\"\" data-semantic-children=\"3\" data-semantic-content=\"0\" data-semantic-role=\"addition\" data-semantic-speech=\"plus or minus 20 Superscript ring\" data-semantic-type=\"prefixop\"><mo data-semantic-=\"\" data-semantic-operator=\"prefixop,±\" data-semantic-parent=\"4\" data-semantic-role=\"addition\" data-semantic-type=\"operator\">±</mo><msup data-semantic-=\"\" data-semantic-children=\"1,2\" data-semantic-parent=\"4\" data-semantic-role=\"integer\" data-semantic-type=\"superscript\"><mn data-semantic-=\"\" data-semantic-annotation=\"clearspeak:simple\" data-semantic-font=\"normal\" data-semantic-parent=\"3\" data-semantic-role=\"integer\" data-semantic-type=\"number\">20</mn><mo data-semantic-=\"\" data-semantic-parent=\"3\" data-semantic-role=\"multiplication\" data-semantic-type=\"operator\">∘</mo></msup></mrow>$\\pm 20^{\\circ }$</annotation></semantics></math></mjx-assistive-mml></mjx-container> for ZnP-COPV and <span data-altimg=\"/cms/asset/5e69988e-403b-4323-b9df-a741226bad16/adts202301212-math-0006.png\"></span><mjx-container ctxtmenu_counter=\"59\" ctxtmenu_oldtabindex=\"1\" jax=\"CHTML\" role=\"application\" sre-explorer- style=\"font-size: 103%; position: relative;\" tabindex=\"0\"><mjx-math aria-hidden=\"true\" location=\"graphic/adts202301212-math-0006.png\"><mjx-semantics><mjx-mrow data-semantic-children=\"3\" data-semantic-content=\"0\" data-semantic- data-semantic-role=\"addition\" data-semantic-speech=\"plus or minus 30 Superscript ring\" data-semantic-type=\"prefixop\"><mjx-mo data-semantic- data-semantic-operator=\"prefixop,±\" data-semantic-parent=\"4\" data-semantic-role=\"addition\" data-semantic-type=\"operator\" rspace=\"1\" style=\"margin-left: 0.056em;\"><mjx-c></mjx-c></mjx-mo><mjx-msup data-semantic-children=\"1,2\" data-semantic- data-semantic-parent=\"4\" data-semantic-role=\"integer\" data-semantic-type=\"superscript\"><mjx-mn data-semantic-annotation=\"clearspeak:simple\" data-semantic-font=\"normal\" data-semantic- data-semantic-parent=\"3\" data-semantic-role=\"integer\" data-semantic-type=\"number\"><mjx-c></mjx-c><mjx-c></mjx-c></mjx-mn><mjx-script style=\"vertical-align: 0.393em;\"><mjx-mo data-semantic- data-semantic-parent=\"3\" data-semantic-role=\"multiplication\" data-semantic-type=\"operator\" size=\"s\"><mjx-c></mjx-c></mjx-mo></mjx-script></mjx-msup></mjx-mrow></mjx-semantics></mjx-math><mjx-assistive-mml display=\"inline\" unselectable=\"on\"><math altimg=\"urn:x-wiley:25130390:media:adts202301212:adts202301212-math-0006\" display=\"inline\" location=\"graphic/adts202301212-math-0006.png\" xmlns=\"http://www.w3.org/1998/Math/MathML\"><semantics><mrow data-semantic-=\"\" data-semantic-children=\"3\" data-semantic-content=\"0\" data-semantic-role=\"addition\" data-semantic-speech=\"plus or minus 30 Superscript ring\" data-semantic-type=\"prefixop\"><mo data-semantic-=\"\" data-semantic-operator=\"prefixop,±\" data-semantic-parent=\"4\" data-semantic-role=\"addition\" data-semantic-type=\"operator\">±</mo><msup data-semantic-=\"\" data-semantic-children=\"1,2\" data-semantic-parent=\"4\" data-semantic-role=\"integer\" data-semantic-type=\"superscript\"><mn data-semantic-=\"\" data-semantic-annotation=\"clearspeak:simple\" data-semantic-font=\"normal\" data-semantic-parent=\"3\" data-semantic-role=\"integer\" data-semantic-type=\"number\">30</mn><mo data-semantic-=\"\" data-semantic-parent=\"3\" data-semantic-role=\"multiplication\" data-semantic-type=\"operator\">∘</mo></msup></mrow>$\\pm 30^{\\circ }$</annotation></semantics></math></mjx-assistive-mml></mjx-container> for COPV-<span data-altimg=\"/cms/asset/8a2f82bf-9cbd-4d3d-9ae0-9f31df9021e1/adts202301212-math-0007.png\"></span><mjx-container ctxtmenu_counter=\"60\" ctxtmenu_oldtabindex=\"1\" jax=\"CHTML\" role=\"application\" sre-explorer- style=\"font-size: 103%; position: relative;\" tabindex=\"0\"><mjx-math aria-hidden=\"true\" location=\"graphic/adts202301212-math-0007.png\"><mjx-semantics><mjx-msub data-semantic-children=\"0,1\" data-semantic- data-semantic-role=\"latinletter\" data-semantic-speech=\"normal upper C 60\" data-semantic-type=\"subscript\"><mjx-mi data-semantic-annotation=\"clearspeak:simple\" data-semantic-font=\"normal\" data-semantic- data-semantic-parent=\"2\" data-semantic-role=\"latinletter\" data-semantic-type=\"identifier\"><mjx-c></mjx-c></mjx-mi><mjx-script style=\"vertical-align: -0.15em;\"><mjx-mn data-semantic-annotation=\"clearspeak:simple\" data-semantic-font=\"normal\" data-semantic- data-semantic-parent=\"2\" data-semantic-role=\"integer\" data-semantic-type=\"number\" size=\"s\"><mjx-c></mjx-c><mjx-c></mjx-c></mjx-mn></mjx-script></mjx-msub></mjx-semantics></mjx-math><mjx-assistive-mml display=\"inline\" unselectable=\"on\"><math altimg=\"urn:x-wiley:25130390:media:adts202301212:adts202301212-math-0007\" display=\"inline\" location=\"graphic/adts202301212-math-0007.png\" xmlns=\"http://www.w3.org/1998/Math/MathML\"><semantics><msub data-semantic-=\"\" data-semantic-children=\"0,1\" data-semantic-role=\"latinletter\" data-semantic-speech=\"normal upper C 60\" data-semantic-type=\"subscript\"><mi data-semantic-=\"\" data-semantic-annotation=\"clearspeak:simple\" data-semantic-font=\"normal\" data-semantic-parent=\"2\" data-semantic-role=\"latinletter\" data-semantic-type=\"identifier\" mathvariant=\"normal\">C</mi><mn data-semantic-=\"\" data-semantic-annotation=\"clearspeak:simple\" data-semantic-font=\"normal\" data-semantic-parent=\"2\" data-semantic-role=\"integer\" data-semantic-type=\"number\">60</mn></msub>${\\rm C}_{60}$</annotation></semantics></math></mjx-assistive-mml></mjx-container>) after thermalization showcases COPV's ability to maintain structural rigidity over time, aligning with the concept of effective <span data-altimg=\"/cms/asset/b85a4da5-4ce0-4f53-97d6-c4db30fc66ca/adts202301212-math-0008.png\"></span><mjx-container ctxtmenu_counter=\"61\" ctxtmenu_oldtabindex=\"1\" jax=\"CHTML\" role=\"application\" sre-explorer- style=\"font-size: 103%; position: relative;\" tabindex=\"0\"><mjx-math aria-hidden=\"true\" location=\"graphic/adts202301212-math-0008.png\"><mjx-semantics><mjx-mi data-semantic-annotation=\"clearspeak:simple\" data-semantic-font=\"italic\" data-semantic- data-semantic-role=\"greekletter\" data-semantic-speech=\"pi\" data-semantic-type=\"identifier\"><mjx-c></mjx-c></mjx-mi></mjx-semantics></mjx-math><mjx-assistive-mml display=\"inline\" unselectable=\"on\"><math altimg=\"urn:x-wiley:25130390:media:adts202301212:adts202301212-math-0008\" display=\"inline\" location=\"graphic/adts202301212-math-0008.png\" xmlns=\"http://www.w3.org/1998/Math/MathML\"><semantics><mi data-semantic-=\"\" data-semantic-annotation=\"clearspeak:simple\" data-semantic-font=\"italic\" data-semantic-role=\"greekletter\" data-semantic-speech=\"pi\" data-semantic-type=\"identifier\">π</mi>$\\pi$</annotation></semantics></math></mjx-assistive-mml></mjx-container>-conjugation. Finally, through the lens of time dependent (TD)-DFT, the dynamic evolution of the HOMO–LUMO energy gap, TD-DFT excitation energies and oscillator strengths are explored as the molecular structure transforms over time. The observed energy gap variation underscores the molecule's adaptability in the face of structural modifications, hinting at an intriguing connection between structural stability and enhanced electronic properties. The research provides a comprehensive understanding of the intricate interplay between conformational dynamics and electronic attributes in organic semiconductors, providing quantitative insights crucial for designing stable, high-performance materials for cutting-edge optoelectronic applications and helping advance the collective understanding of sustainable energy conversion.","PeriodicalId":7219,"journal":{"name":"Advanced Theory and Simulations","volume":"41 1","pages":""},"PeriodicalIF":2.9000,"publicationDate":"2024-10-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Advanced Theory and Simulations","FirstCategoryId":"5","ListUrlMain":"https://doi.org/10.1002/adts.202301212","RegionNum":4,"RegionCategory":"工程技术","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"MULTIDISCIPLINARY SCIENCES","Score":null,"Total":0}
引用次数: 0
Abstract
This research explores the electronic properties and conformational dynamics of the ZnP-COPV- (Zinc Porphyrin - Carbon bridged Oligo Phenylenevinylene - Fullerene) organic semiconductor via specialized Density Functional Theory (DFT) and Molecular Dynamics (MD) computational techniques. First, through DFT calculations, essential HOMO (Highest Occupied Molecular Orbital), LUMO (Lowest Unoccupied Molecular Orbital), and Molecular Electrostatic Potential (MEP) electronic attributes are meticulously dissected providing insights into the intricate charge transfer processes between the constituent donor-acceptor moieties. Furthermore, MD simulations are employed to unveil the molecular system's multifaceted conformational flexibility and stability. The Root-mean-squared deviation (RMSD), end-to-end distance, and torsional angles quantitative analysis of conformational attributes support the carbon-bridged oligo-phenylenevinylene (COPV) molecular wire's -skeleton planar and rigid conformation. This minimal end-to-end distance variation (within Å) compared to the initially extended structure and the constrained torsional motion (within for ZnP-COPV and for COPV-) after thermalization showcases COPV's ability to maintain structural rigidity over time, aligning with the concept of effective -conjugation. Finally, through the lens of time dependent (TD)-DFT, the dynamic evolution of the HOMO–LUMO energy gap, TD-DFT excitation energies and oscillator strengths are explored as the molecular structure transforms over time. The observed energy gap variation underscores the molecule's adaptability in the face of structural modifications, hinting at an intriguing connection between structural stability and enhanced electronic properties. The research provides a comprehensive understanding of the intricate interplay between conformational dynamics and electronic attributes in organic semiconductors, providing quantitative insights crucial for designing stable, high-performance materials for cutting-edge optoelectronic applications and helping advance the collective understanding of sustainable energy conversion.
期刊介绍:
Advanced Theory and Simulations is an interdisciplinary, international, English-language journal that publishes high-quality scientific results focusing on the development and application of theoretical methods, modeling and simulation approaches in all natural science and medicine areas, including:
materials, chemistry, condensed matter physics
engineering, energy
life science, biology, medicine
atmospheric/environmental science, climate science
planetary science, astronomy, cosmology
method development, numerical methods, statistics