Detecting Assembly Errors With Klumpy: Building Confidence in Your Daily Genomic Analysis

IF 5.5 1区生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY

Molecular Ecology Resources Pub Date : 2024-10-23 DOI:10.1111/1755-0998.14037

Isheng Jason Tsai

引用次数: 0

Abstract

In the realm of genome assembly, even minor errors can send researchers down to rabbit holes of unintended misinterpretation. Enter Klumpy—a tool designed to help detecting these elusive mistakes before they cause significant problems. By providing detailed, region-specific assessments and an intuitive visualisation platform, Klumpy (Madrigal, et al. 2024) empowers researchers to pinpoint and resolve potential issues with precision, paving the way for more reliable downstream analyses and discoveries.

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用 Klumpy 检测装配错误：在日常基因组分析中建立信心。

在基因组组装领域，即使是微小的错误也会让研究人员陷入意外误读的兔子洞。Klumpy就是这样一款工具，它可以帮助人们在这些难以捉摸的错误造成重大问题之前就发现它们。通过提供详细的特定区域评估和直观的可视化平台，Klumpy（Madrigal 等人，2024 年）使研究人员能够准确定位和解决潜在问题，为更可靠的下游分析和发现铺平道路。

本文章由计算机程序翻译，如有差异，请以英文原文为准。

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来源期刊

Molecular Ecology Resources 生物-进化生物学

CiteScore

15.60

自引率

5.20%

发文量

170

审稿时长

3 months

期刊介绍： Molecular Ecology Resources promotes the creation of comprehensive resources for the scientific community, encompassing computer programs, statistical and molecular advancements, and a diverse array of molecular tools. Serving as a conduit for disseminating these resources, the journal targets a broad audience of researchers in the fields of evolution, ecology, and conservation. Articles in Molecular Ecology Resources are crafted to support investigations tackling significant questions within these disciplines. In addition to original resource articles, Molecular Ecology Resources features Reviews, Opinions, and Comments relevant to the field. The journal also periodically releases Special Issues focusing on resource development within specific areas.