Unveiling the role of IGF1R in autism spectrum disorder: a multi-omics approach to decipher common pathogenic mechanisms in the IGF signaling pathway.

IF 2.8 3区 生物学 Q2 GENETICS & HEREDITY
Frontiers in Genetics Pub Date : 2024-09-23 eCollection Date: 2024-01-01 DOI:10.3389/fgene.2024.1483574
Kang Yang, Tian Zhang, Ruize Niu, Liyang Zhao, Zhonghe Cheng, Jun Li, Lifang Wang
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Abstract

Autism spectrum disorder (ASD) is a complex neurodevelopmental condition marked by impairments in social interaction, communication, and repetitive behaviors. Emerging evidence suggests that the insulin-like growth factor (IGF) signaling pathway plays a critical role in ASD pathogenesis; however, the precise pathogenic mechanisms remain elusive. This study utilizes multi-omics approaches to investigate the pathogenic mechanisms of ASD susceptibility genes within the IGF pathway. Whole-exome sequencing (WES) revealed a significant enrichment of rare variants in key IGF signaling components, particularly the IGF receptor 1 (IGF1R), in a cohort of Chinese Han individuals diagnosed with ASD, as well as in ASD patients from the SFARI SPARK WES database. Subsequent single-cell RNA sequencing (scRNA-seq) of cortical tissues from children with ASD demonstrated elevated expression of IGF receptors in parvalbumin (PV) interneurons, suggesting a substantial impact on their development. Notably, IGF1R appears to mediate the effects of IGF2R on these neurons. Additionally, transcriptomic analysis of brain organoids derived from ASD patients indicated a significant association between IGF1R and ASD. Protein-protein interaction (PPI) and gene regulatory network (GRN) analyses further identified ASD susceptibility genes that interact with and regulate IGF1R expression. In conclusion, IGF1R emerges as a central node within the IGF signaling pathway, representing a potential common pathogenic mechanism and therapeutic target for ASD. These findings highlight the need for further investigation into the modulation of this pathway as a strategy for ASD intervention.

揭示 IGF1R 在自闭症谱系障碍中的作用:采用多组学方法破译 IGF 信号通路中的常见致病机制。
自闭症谱系障碍(ASD)是一种复杂的神经发育疾病,以社交、沟通和重复行为障碍为特征。新的证据表明,胰岛素样生长因子(IGF)信号通路在自闭症谱系障碍发病机制中起着关键作用;然而,确切的致病机制仍然难以捉摸。本研究利用多组学方法研究 IGF 通路中 ASD 易感基因的致病机制。全外显子组测序(WES)发现,在一组被诊断为ASD的中国汉族人以及来自SFARI SPARK WES数据库的ASD患者中,IGF信号转导关键成分,尤其是IGF受体1(IGF1R)的罕见变异显著富集。随后对ASD患儿皮层组织进行的单细胞RNA测序(scRNA-seq)表明,IGF受体在副发光体(PV)中间神经元中的表达升高,这表明IGF受体对PV中间神经元的发育有重大影响。值得注意的是,IGF1R 似乎介导了 IGF2R 对这些神经元的影响。此外,对来自 ASD 患者的脑器官组织的转录组分析表明,IGF1R 与 ASD 之间存在显著关联。蛋白-蛋白相互作用(PPI)和基因调控网络(GRN)分析进一步确定了与IGF1R相互作用并调控IGF1R表达的ASD易感基因。总之,IGF1R 是 IGF 信号通路中的一个中心节点,代表着一种潜在的共同致病机制和 ASD 的治疗靶点。这些发现凸显了进一步研究调节该通路作为ASD干预策略的必要性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Frontiers in Genetics
Frontiers in Genetics Biochemistry, Genetics and Molecular Biology-Molecular Medicine
CiteScore
5.50
自引率
8.10%
发文量
3491
审稿时长
14 weeks
期刊介绍: Frontiers in Genetics publishes rigorously peer-reviewed research on genes and genomes relating to all the domains of life, from humans to plants to livestock and other model organisms. Led by an outstanding Editorial Board of the world’s leading experts, this multidisciplinary, open-access journal is at the forefront of communicating cutting-edge research to researchers, academics, clinicians, policy makers and the public. The study of inheritance and the impact of the genome on various biological processes is well documented. However, the majority of discoveries are still to come. A new era is seeing major developments in the function and variability of the genome, the use of genetic and genomic tools and the analysis of the genetic basis of various biological phenomena.
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