Analysis of ANO6, HAPLN1, and EDIL3 Polymorphisms in Patients with Ankylosing Spondylitis in a Chinese Han Population: A Case-Control Study.

IF 1.1 4区 生物学 Q4 GENETICS & HEREDITY
Zijian Lian, Wei Luo, Jun Liu, Jing Wang, Wei Chai, Yan Wang, Sahil Sethi, Xinlong Ma
{"title":"Analysis of <i>ANO6, HAPLN1</i>, and <i>EDIL3</i> Polymorphisms in Patients with Ankylosing Spondylitis in a Chinese Han Population: A Case-Control Study.","authors":"Zijian Lian, Wei Luo, Jun Liu, Jing Wang, Wei Chai, Yan Wang, Sahil Sethi, Xinlong Ma","doi":"10.1089/gtmb.2023.0569","DOIUrl":null,"url":null,"abstract":"<p><p><b><i>Background:</i></b> Earlier research has demonstrated a genetic basis for the susceptibility to ankylosing spondylitis (AS) and the severity of AS. By employing a genome-wide association study, recent work has established a correlation between the susceptibility to AS and the <i>ANO6, HAPLN,</i> and <i>EDIL3</i> genes in a Western study population-though alternative studies have not corroborated these findings. This study aims to examine the effects of <i>ANO6</i>, <i>HAPLN1</i>, and <i>EDIL3</i> polymorphisms on the susceptibility and severity of AS among the predominantly Chinese Han population. <b><i>Methods:</i></b> The study involved the collection of blood samples from 497 patients with AS and 498 nonrelated healthy individuals. All participants in the study were human leukocyte antigen (HLA) HLA-B27 positive and of Han Chinese descent. Illness severity was the criteria used for classifying patients with AS. Thirteen tagSNPs in <i>ANO6</i>, <i>HAPLN1</i>, and <i>EDIL3</i> were chosen and then subjected to genetic typing. Analysis was conducted on the occurrence rates of various genotypes and alleles between the control group and patients with varying AS severity. <b><i>Results:</i></b> Following Bonferroni correction, it was found that the rs4768085 and rs17095830 single nucleotide polymorphism (SNPs) in <i>ANO6</i> were related to the susceptibility to AS. Further, the rs6869296 SNP in <i>HAPLN1</i> and the rs2301071 SNP between <i>EDIL3</i> and <i>HAPLN1</i> were also related to AS susceptibility. Regarding AS severity, the rs4768085, rs2897868, rs7965430, and rs11182965 SNPs in <i>ANO6</i> were found to be associated. <b><i>Conclusions:</i></b> Among the Han population in China, the <i>ANO6 and HAPLN1</i> genes are related to the susceptibility to AS; the <i>ANO6</i> gene is also associated with the severity of AS.</p>","PeriodicalId":12603,"journal":{"name":"Genetic testing and molecular biomarkers","volume":" ","pages":"385-392"},"PeriodicalIF":1.1000,"publicationDate":"2024-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Genetic testing and molecular biomarkers","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1089/gtmb.2023.0569","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"GENETICS & HEREDITY","Score":null,"Total":0}
引用次数: 0

Abstract

Background: Earlier research has demonstrated a genetic basis for the susceptibility to ankylosing spondylitis (AS) and the severity of AS. By employing a genome-wide association study, recent work has established a correlation between the susceptibility to AS and the ANO6, HAPLN, and EDIL3 genes in a Western study population-though alternative studies have not corroborated these findings. This study aims to examine the effects of ANO6, HAPLN1, and EDIL3 polymorphisms on the susceptibility and severity of AS among the predominantly Chinese Han population. Methods: The study involved the collection of blood samples from 497 patients with AS and 498 nonrelated healthy individuals. All participants in the study were human leukocyte antigen (HLA) HLA-B27 positive and of Han Chinese descent. Illness severity was the criteria used for classifying patients with AS. Thirteen tagSNPs in ANO6, HAPLN1, and EDIL3 were chosen and then subjected to genetic typing. Analysis was conducted on the occurrence rates of various genotypes and alleles between the control group and patients with varying AS severity. Results: Following Bonferroni correction, it was found that the rs4768085 and rs17095830 single nucleotide polymorphism (SNPs) in ANO6 were related to the susceptibility to AS. Further, the rs6869296 SNP in HAPLN1 and the rs2301071 SNP between EDIL3 and HAPLN1 were also related to AS susceptibility. Regarding AS severity, the rs4768085, rs2897868, rs7965430, and rs11182965 SNPs in ANO6 were found to be associated. Conclusions: Among the Han population in China, the ANO6 and HAPLN1 genes are related to the susceptibility to AS; the ANO6 gene is also associated with the severity of AS.

中国汉族人群中强直性脊柱炎患者的 ANO6、HAPLN1 和 EDIL3 多态性分析:病例对照研究
背景:早期的研究表明,强直性脊柱炎(AS)的易感性和严重程度与遗传有关。通过采用全基因组关联研究,最近的研究在西方研究人群中确定了强直性脊柱炎易感性与 ANO6、HAPLN 和 EDIL3 基因之间的相关性--尽管其他研究并未证实这些发现。本研究旨在探讨 ANO6、HAPLN1 和 EDIL3 多态性对以中国汉族为主的人群中强直性脊柱炎易感性和严重程度的影响。研究方法研究收集了 497 名强直性脊柱炎患者和 498 名非亲缘健康人的血样。所有参与者均为人类白细胞抗原(HLA)HLA-B27阳性的汉族后裔。疾病严重程度是强直性脊柱炎患者的分类标准。研究人员选取了 ANO6、HAPLN1 和 EDIL3 中的 13 个 tagSNPs 进行基因分型。分析了对照组和不同强直性脊柱炎严重程度患者之间各种基因型和等位基因的出现率。结果显示经Bonferroni校正后发现,ANO6中的rs4768085和rs17095830单核苷酸多态性(SNPs)与强直性脊柱炎的易感性有关。此外,HAPLN1 中的 rs6869296 SNP 和 EDIL3 与 HAPLN1 之间的 rs2301071 SNP 也与 AS 易感性有关。关于强直性脊柱炎的严重程度,ANO6 中的 rs4768085、rs2897868、rs7965430 和 rs11182965 SNPs 被发现与之相关。结论在中国汉族人群中,ANO6和HAPLN1基因与强直性脊柱炎的易感性有关;ANO6基因还与强直性脊柱炎的严重程度有关。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
CiteScore
2.50
自引率
7.10%
发文量
63
审稿时长
1 months
期刊介绍: Genetic Testing and Molecular Biomarkers is the leading peer-reviewed journal covering all aspects of human genetic testing including molecular biomarkers. The Journal provides a forum for the development of new technology; the application of testing to decision making in an increasingly varied set of clinical situations; ethical, legal, social, and economic aspects of genetic testing; and issues concerning effective genetic counseling. This is the definitive resource for researchers, clinicians, and scientists who develop, perform, and interpret genetic tests and their results. Genetic Testing and Molecular Biomarkers coverage includes: -Diagnosis across the life span- Risk assessment- Carrier detection in individuals, couples, and populations- Novel methods and new instrumentation for genetic testing- Results of molecular, biochemical, and cytogenetic testing- Genetic counseling
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信