Rosana M. Lobayan, Patricio F. Provasi, Alicia B. Pomilio
{"title":"AIM/NBO Analysis of the Geminal Coupling Constants in the Stabilization of A-Type Dimeric Proanthocyanidin: Angular Dependence","authors":"Rosana M. Lobayan, Patricio F. Provasi, Alicia B. Pomilio","doi":"10.1002/mrc.5479","DOIUrl":null,"url":null,"abstract":"<div>\n \n <p>The angular dependence of the indirect short-range spin-spin coupling constants (SSCC), the geminal \n<span></span><math>\n <semantics>\n <mrow>\n <mi>J</mi>\n <mo>(</mo>\n <msub>\n <mrow>\n <mi>C</mi>\n </mrow>\n <mrow>\n <mn>3</mn>\n </mrow>\n </msub>\n <mo>,</mo>\n <msub>\n <mrow>\n <mi>C</mi>\n </mrow>\n <mrow>\n <msup>\n <mrow>\n <mn>1</mn>\n </mrow>\n <mrow>\n <mo>′</mo>\n </mrow>\n </msup>\n </mrow>\n </msub>\n <mo>)</mo>\n </mrow>\n <annotation>$$ J\\left({C}_3,{C}_{1&amp;#x0005E;{\\prime }}\\right) $$</annotation>\n </semantics></math>, \n<span></span><math>\n <semantics>\n <mrow>\n <mi>J</mi>\n <mo>(</mo>\n <msub>\n <mrow>\n <mi>O</mi>\n </mrow>\n <mrow>\n <mn>1</mn>\n </mrow>\n </msub>\n <mo>,</mo>\n <mi>O</mi>\n <mo>)</mo>\n </mrow>\n <annotation>$$ J\\left({O}_1,O\\right) $$</annotation>\n </semantics></math>, and \n<span></span><math>\n <semantics>\n <mrow>\n <mi>J</mi>\n <mo>(</mo>\n <mi>O</mi>\n <mo>,</mo>\n <msub>\n <mrow>\n <mi>C</mi>\n </mrow>\n <mrow>\n <msup>\n <mrow>\n <mn>1</mn>\n </mrow>\n <mrow>\n <mo>′</mo>\n </mrow>\n </msup>\n </mrow>\n </msub>\n <mo>)</mo>\n </mrow>\n <annotation>$$ J\\left(O,{C}_{1&amp;#x0005E;{\\prime }}\\right) $$</annotation>\n </semantics></math> in A-type dimeric proanthocyanidin, was investigated using density functional theory. We studied the rotation of ring B around the \n<span></span><math>\n <semantics>\n <mrow>\n <msub>\n <mrow>\n <mi>C</mi>\n </mrow>\n <mrow>\n <mn>2</mn>\n </mrow>\n </msub>\n <mtext>–</mtext>\n <msub>\n <mrow>\n <mi>C</mi>\n </mrow>\n <mrow>\n <msup>\n <mrow>\n <mn>1</mn>\n </mrow>\n <mrow>\n <mo>′</mo>\n </mrow>\n </msup>\n </mrow>\n </msub>\n </mrow>\n <annotation>$$ {C}_2\\hbox{--} {C}_{1&amp;#x0005E;{\\prime }} $$</annotation>\n </semantics></math> bond. Therefore, we calculated hyperconjugative charge transfers and bond polarizations within the natural bond orbital (NBO) approach, performing a topological study based on Bader's theory, AIM (atoms in molecules), and analyzing the angular dependence of AIM/NBO parameters. The results describe a relationship between the geminal coupling that changes with angular variation and NBO charge transfers to the bonds involved in the coupling pathways that can explain the behavior of the former property. Based on AIM/NBO data, inductive and mesomeric effects were described and quantified, showing a clear correlation with the stabilization of the structure, demonstrating a resonance-assisted inductive effect. We also set out strong hyperconjugative interactions (anomeric effect) involving nonbonding electron pairs of oxygen atoms. This analysis of coupling constants supports previous models by other authors and shows the application in this particular case. Moreover, the SSCCs studied herein are used for identifying stable structures and conformational search analysis of flavonoids. Finally, our results show the relationship between SSCCs and the structure stabilization and charge delocalization effects.</p>\n </div>","PeriodicalId":18142,"journal":{"name":"Magnetic Resonance in Chemistry","volume":null,"pages":null},"PeriodicalIF":1.9000,"publicationDate":"2024-09-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Magnetic Resonance in Chemistry","FirstCategoryId":"92","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1002/mrc.5479","RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"CHEMISTRY, MULTIDISCIPLINARY","Score":null,"Total":0}
引用次数: 0
Abstract
The angular dependence of the indirect short-range spin-spin coupling constants (SSCC), the geminal
,
, and
in A-type dimeric proanthocyanidin, was investigated using density functional theory. We studied the rotation of ring B around the
bond. Therefore, we calculated hyperconjugative charge transfers and bond polarizations within the natural bond orbital (NBO) approach, performing a topological study based on Bader's theory, AIM (atoms in molecules), and analyzing the angular dependence of AIM/NBO parameters. The results describe a relationship between the geminal coupling that changes with angular variation and NBO charge transfers to the bonds involved in the coupling pathways that can explain the behavior of the former property. Based on AIM/NBO data, inductive and mesomeric effects were described and quantified, showing a clear correlation with the stabilization of the structure, demonstrating a resonance-assisted inductive effect. We also set out strong hyperconjugative interactions (anomeric effect) involving nonbonding electron pairs of oxygen atoms. This analysis of coupling constants supports previous models by other authors and shows the application in this particular case. Moreover, the SSCCs studied herein are used for identifying stable structures and conformational search analysis of flavonoids. Finally, our results show the relationship between SSCCs and the structure stabilization and charge delocalization effects.
期刊介绍:
MRC is devoted to the rapid publication of papers which are concerned with the development of magnetic resonance techniques, or in which the application of such techniques plays a pivotal part. Contributions from scientists working in all areas of NMR, ESR and NQR are invited, and papers describing applications in all branches of chemistry, structural biology and materials chemistry are published.
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