Accelerated failure time models with error-prone response and nonlinear covariates

IF 1.6 2区 数学 Q2 COMPUTER SCIENCE, THEORY & METHODS
Li-Pang Chen
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引用次数: 0

Abstract

As a specific application of survival analysis, one of main interests in medical studies aims to analyze the patients’ survival time of a specific cancer. Typically, gene expressions are treated as covariates to characterize the survival time. In the framework of survival analysis, the accelerated failure time model in the parametric form is perhaps a common approach. However, gene expressions are possibly nonlinear and the survival time as well as censoring status are subject to measurement error. In this paper, we aim to tackle those complex features simultaneously. We first correct for measurement error in survival time and censoring status, and use them to develop a corrected Buckley–James estimator. After that, we use the boosting algorithm with the cubic spline estimation method to iteratively recover nonlinear relationship between covariates and survival time. Theoretically, we justify the validity of measurement error correction and estimation procedure. Numerical studies show that the proposed method improves the performance of estimation and is able to capture informative covariates. The methodology is primarily used to analyze the breast cancer data provided by the Netherlands Cancer Institute for research.

Abstract Image

具有易出错响应和非线性协变量的加速故障时间模型
作为生存分析的一个具体应用,医学研究的主要兴趣之一是分析特定癌症患者的生存时间。通常情况下,基因表达被视为协变量来描述生存时间。在生存分析框架中,参数形式的加速失效时间模型也许是一种常见的方法。然而,基因表达可能是非线性的,生存时间和普查状态也会受到测量误差的影响。本文旨在同时解决这些复杂的问题。我们首先修正了生存时间和普查状态的测量误差,并利用它们开发了一个修正的巴克利-詹姆斯估计器。之后,我们使用提升算法和三次样条估计方法迭代恢复协变量和生存时间之间的非线性关系。我们从理论上证明了测量误差校正和估计程序的有效性。数值研究表明,所提出的方法提高了估计的性能,并能捕捉到有信息量的协变量。该方法主要用于分析荷兰癌症研究所提供的乳腺癌研究数据。
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来源期刊
Statistics and Computing
Statistics and Computing 数学-计算机:理论方法
CiteScore
3.20
自引率
4.50%
发文量
93
审稿时长
6-12 weeks
期刊介绍: Statistics and Computing is a bi-monthly refereed journal which publishes papers covering the range of the interface between the statistical and computing sciences. In particular, it addresses the use of statistical concepts in computing science, for example in machine learning, computer vision and data analytics, as well as the use of computers in data modelling, prediction and analysis. Specific topics which are covered include: techniques for evaluating analytically intractable problems such as bootstrap resampling, Markov chain Monte Carlo, sequential Monte Carlo, approximate Bayesian computation, search and optimization methods, stochastic simulation and Monte Carlo, graphics, computer environments, statistical approaches to software errors, information retrieval, machine learning, statistics of databases and database technology, huge data sets and big data analytics, computer algebra, graphical models, image processing, tomography, inverse problems and uncertainty quantification. In addition, the journal contains original research reports, authoritative review papers, discussed papers, and occasional special issues on particular topics or carrying proceedings of relevant conferences. Statistics and Computing also publishes book review and software review sections.
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