Hyperedge Representations with Hypergraph Wavelets: Applications to Spatial Transcriptomics

Xingzhi Sun, Charles Xu, João F. Rocha, Chen Liu, Benjamin Hollander-Bodie, Laney Goldman, Marcello DiStasio, Michael Perlmutter, Smita Krishnaswamy
{"title":"Hyperedge Representations with Hypergraph Wavelets: Applications to Spatial Transcriptomics","authors":"Xingzhi Sun, Charles Xu, João F. Rocha, Chen Liu, Benjamin Hollander-Bodie, Laney Goldman, Marcello DiStasio, Michael Perlmutter, Smita Krishnaswamy","doi":"arxiv-2409.09469","DOIUrl":null,"url":null,"abstract":"In many data-driven applications, higher-order relationships among multiple\nobjects are essential in capturing complex interactions. Hypergraphs, which\ngeneralize graphs by allowing edges to connect any number of nodes, provide a\nflexible and powerful framework for modeling such higher-order relationships.\nIn this work, we introduce hypergraph diffusion wavelets and describe their\nfavorable spectral and spatial properties. We demonstrate their utility for\nbiomedical discovery in spatially resolved transcriptomics by applying the\nmethod to represent disease-relevant cellular niches for Alzheimer's disease.","PeriodicalId":501034,"journal":{"name":"arXiv - EE - Signal Processing","volume":null,"pages":null},"PeriodicalIF":0.0000,"publicationDate":"2024-09-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"arXiv - EE - Signal Processing","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/arxiv-2409.09469","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0

Abstract

In many data-driven applications, higher-order relationships among multiple objects are essential in capturing complex interactions. Hypergraphs, which generalize graphs by allowing edges to connect any number of nodes, provide a flexible and powerful framework for modeling such higher-order relationships. In this work, we introduce hypergraph diffusion wavelets and describe their favorable spectral and spatial properties. We demonstrate their utility for biomedical discovery in spatially resolved transcriptomics by applying the method to represent disease-relevant cellular niches for Alzheimer's disease.
使用超图小波的 Hyperedge 表示法:空间转录组学应用
在许多数据驱动型应用中,多个对象之间的高阶关系对于捕捉复杂的相互作用至关重要。超图允许边连接任意数量的节点,从而对图进行了泛化,为此类高阶关系的建模提供了一个灵活而强大的框架。在这项工作中,我们介绍了超图扩散小波,并描述了其有利的频谱和空间特性。通过应用这种方法来表示阿尔茨海默病的疾病相关细胞龛,我们展示了它们在空间解析转录组学的生物医学发现中的实用性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信