RetVes segmentation: A pseudo-labeling and feature knowledge distillation optimization technique for retinal vessel channel enhancement

IF 7 2区 医学 Q1 BIOLOGY
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引用次数: 0

Abstract

Recent advancements in retinal vessel segmentation, which employ transformer-based and domain-adaptive approaches, show promise in addressing the complexity of ocular diseases such as diabetic retinopathy. However, current algorithms face challenges in effectively accommodating domain-specific variations and limitations of training datasets, which fail to represent real-world conditions comprehensively. Manual inspection by specialists remains time-consuming despite technological progress in medical imaging, underscoring the pressing need for automated and robust segmentation techniques. Additionally, these methods have deficiencies in handling unlabeled target sets, requiring extra preprocessing steps and manual intervention, which hinders their scalability and practical application in clinical settings. This research introduces a novel framework that employs semi-supervised domain adaptation and contrastive pre-training to address these limitations. The proposed model effectively learns from target data by implementing a novel pseudo-labeling approach and feature-based knowledge distillation within a temporal convolutional network (TCN) and extracts robust, domain-independent features. This approach enhances cross-domain adaptation, significantly enhancing the model's versatility and performance in clinical settings. The semi-supervised domain adaptation component overcomes the challenges posed by domain shifts, while pseudo-labeling utilizes the data's inherent structure for enhanced learning, which is particularly beneficial when labeled data is scarce. Evaluated on the DRIVE and CHASE_DB1 datasets, which contain clinical fundus images, the proposed model achieves outstanding performance, with accuracy, sensitivity, specificity, and AUC values of 0.9792, 0.8640, 0.9901, and 0.9868 on DRIVE, and 0.9830, 0.9058, 0.9888, and 0.9950 on CHASE_DB1, respectively, outperforming current state-of-the-art vessel segmentation methods. The partitioning of datasets into training and testing sets ensures thorough validation, while extensive ablation studies with thorough sensitivity analysis of the model's parameters and different percentages of labeled data further validate its robustness.

视网膜血管分割:用于视网膜血管通道增强的伪标记和特征知识提炼优化技术
最近在视网膜血管分割方面取得的进展表明,采用基于变压器和域自适应的方法有望解决糖尿病视网膜病变等眼科疾病的复杂性。然而,当前的算法在有效适应特定领域的变化和训练数据集的局限性方面面临着挑战,因为这些数据集无法全面反映真实世界的状况。尽管医学成像技术在不断进步,但由专家进行人工检查仍然非常耗时,这凸显了对自动化和强大的分割技术的迫切需要。此外,这些方法在处理无标记目标集方面存在缺陷,需要额外的预处理步骤和人工干预,这阻碍了它们在临床环境中的可扩展性和实际应用。这项研究引入了一个新颖的框架,利用半监督领域适应和对比预训练来解决这些局限性。所提出的模型通过在时序卷积网络(TCN)中实施新颖的伪标记方法和基于特征的知识提炼,有效地从目标数据中学习,并提取稳健的、与领域无关的特征。这种方法增强了跨领域适应性,大大提高了模型在临床环境中的通用性和性能。半监督领域适应组件克服了领域转移带来的挑战,而伪标记则利用数据的固有结构来增强学习,这在标记数据稀缺的情况下尤为有益。在包含临床眼底图像的DRIVE和CHASE_DB1数据集上进行评估,所提出的模型取得了出色的性能,在DRIVE数据集上的准确度、灵敏度、特异度和AUC值分别为0.9792、0.8640、0.9901和0.9868,在CHASE_DB1数据集上的准确度、灵敏度、特异度和AUC值分别为0.9830、0.9058、0.9888和0.9950,优于目前最先进的血管分割方法。将数据集划分为训练集和测试集确保了彻底的验证,而广泛的消融研究以及对模型参数和不同百分比标记数据的彻底敏感性分析进一步验证了其稳健性。
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来源期刊
Computers in biology and medicine
Computers in biology and medicine 工程技术-工程:生物医学
CiteScore
11.70
自引率
10.40%
发文量
1086
审稿时长
74 days
期刊介绍: Computers in Biology and Medicine is an international forum for sharing groundbreaking advancements in the use of computers in bioscience and medicine. This journal serves as a medium for communicating essential research, instruction, ideas, and information regarding the rapidly evolving field of computer applications in these domains. By encouraging the exchange of knowledge, we aim to facilitate progress and innovation in the utilization of computers in biology and medicine.
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