Soichi Hirokawa, Heun Jin Lee, Rachel A Banks, Ana I Duarte, Bibi Najma, Matt Thomson, Rob Phillips
{"title":"Motor-driven microtubule diffusion in a photobleached dynamical coordinate system","authors":"Soichi Hirokawa, Heun Jin Lee, Rachel A Banks, Ana I Duarte, Bibi Najma, Matt Thomson, Rob Phillips","doi":"arxiv-2408.11216","DOIUrl":null,"url":null,"abstract":"Motor-driven cytoskeletal remodeling in cellular systems can often be\naccompanied by a diffusive-like effect at local scales, but distinguishing the\ncontributions of the ordering process, such as active contraction of a network,\nfrom this active diffusion is difficult to achieve. Using light-dimerizable\nkinesin motors to spatially control the formation and contraction of a\nmicrotubule network, we deliberately photobleach a grid pattern onto the\nfilament network serving as a transient and dynamic coordinate system to\nobserve the deformation and translation of the remaining fluorescent squares of\nmicrotubules. We find that the network contracts at a rate set by motor speed\nbut is accompanied by a diffusive-like spread throughout the bulk of the\ncontracting network with effective diffusion constant two orders of magnitude\nlower than that for a freely-diffusing microtubule. We further find that on\nmicron scales, the diffusive timescale is only a factor of approximately 3\nslower than that of advection regardless of conditions, showing that the global\ncontraction and long-time relaxation from this diffusive behavior are both\nmotor-driven but exhibit local competition within the network bulk.","PeriodicalId":501040,"journal":{"name":"arXiv - PHYS - Biological Physics","volume":null,"pages":null},"PeriodicalIF":0.0000,"publicationDate":"2024-08-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"arXiv - PHYS - Biological Physics","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/arxiv-2408.11216","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
Abstract
Motor-driven cytoskeletal remodeling in cellular systems can often be
accompanied by a diffusive-like effect at local scales, but distinguishing the
contributions of the ordering process, such as active contraction of a network,
from this active diffusion is difficult to achieve. Using light-dimerizable
kinesin motors to spatially control the formation and contraction of a
microtubule network, we deliberately photobleach a grid pattern onto the
filament network serving as a transient and dynamic coordinate system to
observe the deformation and translation of the remaining fluorescent squares of
microtubules. We find that the network contracts at a rate set by motor speed
but is accompanied by a diffusive-like spread throughout the bulk of the
contracting network with effective diffusion constant two orders of magnitude
lower than that for a freely-diffusing microtubule. We further find that on
micron scales, the diffusive timescale is only a factor of approximately 3
slower than that of advection regardless of conditions, showing that the global
contraction and long-time relaxation from this diffusive behavior are both
motor-driven but exhibit local competition within the network bulk.