Identification of Lung Adenocarcinoma Subtypes by Using Growth Hormone-Releasing Hormone-Related Genes and Establishment of Signature to Predict Prognosis and Guide Immunother
Kai Zhu, Zhenwu Xu, Xue Peng, Chenhua Xu, Shengjia Chen
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引用次数: 0
Abstract
Background: Growth hormone-releasing hormone (GH-RH) and its antagonists are believed to influence the progression of varying tumor diseases. However, the specific effects of GH-RH-related genes on lung adenocarcinoma (LUAD) are yet to be deciphered.
Methods: GH-RH-related gene set data, LUAD transcriptome data, and clinical data were available for download at GeneCards, TCGA, and GEO databases. R software was implemented to finish differential, regression, cluster, survival, and tumor microenvironment analyses. Drugs associated with model genes were predicted using CellMiner database.
Results: 781 LUAD samples (TCGA-LUAD: 600 cases; GSE50081: 181 cases) and data for 1555 GH-RH-related gene sets were obtained from public datasets. Two LUAD subtypes with different GH-RH gene expressions were identified through cluster analysis. Significant differences were unveiled in prognosis between the two subtypes. A prognostic risk scoring model was generated based on genes screened from the PPI network, and afterward, the model was validated. The model comprised 7 genes, specifically CLCA1, CYP17A1, DKK1, IGF2BP1, IGFBP1, RPE65, and VGF. Immune-related analysis revealed significant differences in immune cell infiltration levels between high and low-risk groups (P<0.05), with mast cells and neutrophils showing significantly higher infiltration levels in the low-risk population than the other group.
Conclusion: The 7-gene signature in the current study is of paramount importance for predicting overall survival and immune microenvironment of LUAD patients.
期刊介绍:
The Journal of Environmental Pathology, Toxicology and Oncology publishes original research and reviews of factors and conditions that affect human and animal carcinogensis. Scientists in various fields of biological research, such as toxicologists, chemists, immunologists, pharmacologists, oncologists, pneumologists, and industrial technologists, will find this journal useful in their research on the interface between the environment, humans, and animals.