Discovering Motifs to Fingerprint Multi-Layer Networks: a Case Study on the Connectome of C. Elegans

Deepak Sharma, Matthias Renz, Philipp Hövel
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Abstract

Motif discovery is a powerful approach to understanding network structures and their function. We present a comprehensive analysis of regulatory motifs in the connectome of the model organism Caenorhabditis elegans (C. elegans). Leveraging the Efficient Subgraph Counting Algorithmic PackagE (ESCAPE) algorithm, we identify network motifs in the multi-layer nervous system of C. elegans and link them to functional circuits. We further investigate motif enrichment within signal pathways and benchmark our findings with random networks of similar size and link density. Our findings provide valuable insights into the organization of the nerve net of this well documented organism and can be easily transferred to other species and disciplines alike.
发现多层网络的指纹图案:关于 C. Elegans 连接组的案例研究
发现基元是了解网络结构及其功能的有力方法。利用高效子图计数算法 PackagE(ESCAPE)算法,我们识别了秀丽隐杆线虫多层神经系统中的网络主题,并将它们与功能回路联系起来。我们进一步研究了信号通路中的主题富集,并将我们的研究结果与类似大小和链接密度的随机网络进行比较。我们的研究结果为了解这种有据可查的生物的神经网络组织提供了有价值的见解,并且可以很容易地应用到其他物种和学科中。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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