{"title":"Discovering Motifs to Fingerprint Multi-Layer Networks: a Case Study on the Connectome of C. Elegans","authors":"Deepak Sharma, Matthias Renz, Philipp Hövel","doi":"arxiv-2408.13263","DOIUrl":null,"url":null,"abstract":"Motif discovery is a powerful approach to understanding network structures\nand their function. We present a comprehensive analysis of regulatory motifs in\nthe connectome of the model organism Caenorhabditis elegans (C. elegans).\nLeveraging the Efficient Subgraph Counting Algorithmic PackagE (ESCAPE)\nalgorithm, we identify network motifs in the multi-layer nervous system of C.\nelegans and link them to functional circuits. We further investigate motif\nenrichment within signal pathways and benchmark our findings with random\nnetworks of similar size and link density. Our findings provide valuable\ninsights into the organization of the nerve net of this well documented\norganism and can be easily transferred to other species and disciplines alike.","PeriodicalId":501325,"journal":{"name":"arXiv - QuanBio - Molecular Networks","volume":"3 6 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2024-08-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"arXiv - QuanBio - Molecular Networks","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/arxiv-2408.13263","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
Abstract
Motif discovery is a powerful approach to understanding network structures
and their function. We present a comprehensive analysis of regulatory motifs in
the connectome of the model organism Caenorhabditis elegans (C. elegans).
Leveraging the Efficient Subgraph Counting Algorithmic PackagE (ESCAPE)
algorithm, we identify network motifs in the multi-layer nervous system of C.
elegans and link them to functional circuits. We further investigate motif
enrichment within signal pathways and benchmark our findings with random
networks of similar size and link density. Our findings provide valuable
insights into the organization of the nerve net of this well documented
organism and can be easily transferred to other species and disciplines alike.