Fast Medical Shape Reconstruction via Meta-learned Implicit Neural Representations

Gaia Romana De Paolis, Dimitrios Lenis, Johannes Novotny, Maria Wimmer, Astrid Berg, Theresa Neubauer, Philip Matthias Winter, David Major, Ariharasudhan Muthusami, Gerald Schröcker, Martin Mienkina, Katja Bühler
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Abstract

Efficient and fast reconstruction of anatomical structures plays a crucial role in clinical practice. Minimizing retrieval and processing times not only potentially enhances swift response and decision-making in critical scenarios but also supports interactive surgical planning and navigation. Recent methods attempt to solve the medical shape reconstruction problem by utilizing implicit neural functions. However, their performance suffers in terms of generalization and computation time, a critical metric for real-time applications. To address these challenges, we propose to leverage meta-learning to improve the network parameters initialization, reducing inference time by an order of magnitude while maintaining high accuracy. We evaluate our approach on three public datasets covering different anatomical shapes and modalities, namely CT and MRI. Our experimental results show that our model can handle various input configurations, such as sparse slices with different orientations and spacings. Additionally, we demonstrate that our method exhibits strong transferable capabilities in generalizing to shape domains unobserved at training time.
通过元学习隐含神经表征实现快速医学形状重构
高效、快速地重建解剖结构在临床实践中起着至关重要的作用。尽量缩短检索和处理时间不仅能在关键场景中提高快速反应和决策能力,还能支持交互式手术规划和导航。最近的方法试图利用隐式神经函数来解决医学形状重建问题。然而,这些方法在泛化和计算时间(实时应用的关键指标)方面表现不佳。为了应对这些挑战,我们建议利用元学习来改进网络参数初始化,从而将推理时间减少一个数量级,同时保持高精度。我们在三个公共数据集(涵盖不同的解剖形状和模式,即 CT 和 MRI)上评估了我们的方法。实验结果表明,我们的模型可以处理各种输入配置,例如具有不同方向和间距的稀疏切片。此外,我们还证明了我们的方法在泛化到训练时未观察到的形状域方面具有很强的可迁移能力。
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