Jia Zhang, Li Xiao, Peng Qi, Yaling Zeng, Xumeng Chen, Duan-fang Liao, Kai Li
{"title":"Superimposed Hi-C: A Solution Proposed for Identifying Single Cell's Chromosomal Interactions","authors":"Jia Zhang, Li Xiao, Peng Qi, Yaling Zeng, Xumeng Chen, Duan-fang Liao, Kai Li","doi":"arxiv-2408.13039","DOIUrl":null,"url":null,"abstract":"Hi-C sequencing is widely used for analyzing chromosomal interactions. In\nthis study, we propose \"superimposed Hi-C\" which features paired EcoP15I sites\nin a linker to facilitate sticky-end ligation with target DNAs. Superimposed\nHi-C overcomes Hi-C's technical limitations, enabling the identification of\nsingle cell's chromosomal interactions.","PeriodicalId":501070,"journal":{"name":"arXiv - QuanBio - Genomics","volume":"10 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2024-08-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"arXiv - QuanBio - Genomics","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/arxiv-2408.13039","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
Abstract
Hi-C sequencing is widely used for analyzing chromosomal interactions. In
this study, we propose "superimposed Hi-C" which features paired EcoP15I sites
in a linker to facilitate sticky-end ligation with target DNAs. Superimposed
Hi-C overcomes Hi-C's technical limitations, enabling the identification of
single cell's chromosomal interactions.