Comparative chloroplast genome analysis of tribe Jasmineae (Oleaceae, Lamiales)

IF 16.4 1区化学 Q1 CHEMISTRY, MULTIDISCIPLINARY

Accounts of Chemical Research Pub Date : 2024-09-05 DOI:10.1007/s40415-024-01040-9

Thi Thanh Nga Le, Hoang Dang Khoa Do

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Abstract

Jasminum L., a genus of Oleaceae, contains different species that are often used in medicinal and industrial fields. Genomic data of Jasminum are essential for elucidating the evolutionary history and mining DNA-based applications. Therefore, in this study, the complete chloroplast genomes of Jasminum nervosum Lour. and Jasminum multiflorum (Burm.f.) Andrews were sequenced and characterized based on the next-generation sequencing method. Consequently, typical quadripartite chloroplast genomes of 162,855 bp and 163,248 bp were completed for J. multiflorum and J. nervosum, respectively. Comparative genomic analysis among chloroplast genomes of tribe Jasmineae revealed different numbers of repeats, inversion of pafI-pafII region, loss of accD, and loss of clpP introns. Phylogenetic analysis revealed the monophyly of five tribes of Oleaceae. J. nervosum was closely related to J. multiflorum formed compared to other Jasminum taxa. The newly completed chloroplast genomes of Jasminum species enlarged the genomic data and provided useful information for further studies on genomic evolution, population genetics, and phylogeny of Oleaceae.

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茉莉花科（油橄榄科，唇形科）叶绿体基因组比较分析

茉莉属（Jasminum L.）是油茶科（Oleaceae）的一个属，包含不同的物种，这些物种通常用于医药和工业领域。茉莉花的基因组数据对于阐明其进化历史和挖掘基于 DNA 的应用至关重要。因此，本研究采用新一代测序方法对神经茉莉（Jasminum nervosum Lour.）和多花茉莉（Jasminum multiflorum (Burm.f.) Andrews）的叶绿体基因组进行了测序和鉴定。结果，多花茉莉（J. multiflorum）和神经茉莉（J. nervosum）分别完成了 162,855 bp 和 163,248 bp 的典型四方叶绿体基因组。对茉莉科植物叶绿体基因组的比较分析表明，它们的重复数目、pafI-pafII 区域的反转、accD 的缺失和 clpP 内含子的缺失各不相同。系统进化分析表明油茶科的五个支系为单系。与其他茉莉类群相比，神经茉莉（J. nervosum）与多花茉莉（J. multiflorum）亲缘关系密切。新完成的茉莉属植物叶绿体基因组扩大了基因组数据，为进一步研究油茶科植物的基因组进化、种群遗传学和系统发育提供了有用信息。

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来源期刊

Accounts of Chemical Research 化学-化学综合

CiteScore

31.40

自引率

1.10%

发文量

312

审稿时长

2 months

期刊介绍： Accounts of Chemical Research presents short, concise and critical articles offering easy-to-read overviews of basic research and applications in all areas of chemistry and biochemistry. These short reviews focus on research from the author’s own laboratory and are designed to teach the reader about a research project. In addition, Accounts of Chemical Research publishes commentaries that give an informed opinion on a current research problem. Special Issues online are devoted to a single topic of unusual activity and significance. Accounts of Chemical Research replaces the traditional article abstract with an article "Conspectus." These entries synopsize the research affording the reader a closer look at the content and significance of an article. Through this provision of a more detailed description of the article contents, the Conspectus enhances the article's discoverability by search engines and the exposure for the research.