The complete chloroplast genome sequences of Delavaya toxocarpa and Harpullia cupanioides (Dodonaeoideae, Sapindaceae)

IF 1.4 4区生物学 Q3 PLANT SCIENCES

Brazilian Journal of Botany Pub Date : 2024-08-20 DOI:10.1007/s40415-024-01037-4

Limin Cao, Zhixin Wang, Weimin Jiang, Yanfen Chang

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Abstract

The complete chloroplast (cp) genomes of Delavaya toxocarpa and Harpullia cupanioides were reported here. In D. toxocarpa, the total genome size was 161,325 bp in length, consisting of two IRs (26, 698 bp) separated by the LSC (88,698 bp) and SSC (19,231 bp) regions. The genome contained 131 genes, including 85 protein-coding genes, 37 tRNA genes and 8 rRNA genes, respectively. The GC-content of the complete chloroplast genome was 37.5%. As to H. cupanioides, the complete chloroplast genome was 159, 776 bp in length, consisting of two IRs (26,938 bp) separated by the LSC (87,804 bp) and SSC (18,096 bp) regions. The genome contained 131 genes, including 85 protein-coding genes, 37 tRNA genes and 8 rRNA genes, respectively. The GC-content of the complete chloroplast genome was 37.8%. A phylogenetic analysis indicated that D. toxocarpa was closely related to Koelreuteria, while H. cupanioides was close with Dodonaea viscosa. This study will be useful for the phylogenetic position determination as well as future phylogenetic studies of Delavaya toxocarpa and H. cupanioides.

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Delavaya toxocarpa 和 Harpullia cupanioides（无患子科）叶绿体基因组的完整序列

本文报告了Delavaya toxocarpa和Harpullia cupanioides的完整叶绿体（cp）基因组。D.toxocarpa的基因组总长度为161,325 bp，由两个IR区（26,698 bp）和LSC区（88,698 bp）和SSC区（19,231 bp）组成。基因组包含 131 个基因，包括 85 个蛋白质编码基因、37 个 tRNA 基因和 8 个 rRNA 基因。完整叶绿体基因组的 GC 含量为 37.5%。杯状叶绿体（H. cupanioides）的完整叶绿体基因组长度为 159 776 bp，由两个 IR 区（26 938 bp）和 LSC 区（87 804 bp）和 SSC 区（18 096 bp）组成。基因组包含 131 个基因，包括 85 个蛋白质编码基因、37 个 tRNA 基因和 8 个 rRNA 基因。完整叶绿体基因组的 GC 含量为 37.8%。系统进化分析表明，D. toxocarpa 与 Koelreuteria 关系密切，而 H. cupanioides 与 Dodonaea viscosa 关系密切。这项研究将有助于确定Delavaya toxocarpa和H. cupanioides的系统发育位置以及未来的系统发育研究。

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来源期刊

Brazilian Journal of Botany Agricultural and Biological Sciences-Plant Science

CiteScore

3.00

自引率

12.50%

发文量

期刊介绍： The Brazilian Journal of Botany is an international journal devoted to publishing a wide-range of research in plant sciences: biogeography, cytogenetics, ecology, economic botany, physiology and biochemistry, morphology and anatomy, molecular biology and diversity phycology, mycology, palynology, and systematics and phylogeny. The journal considers for publications original articles, short communications, reviews, and letters to the editor. Manuscripts describing new taxa based on morphological data only are suitable for submission; however information from multiple sources, such as ultrastructure, phytochemistry and molecular evidence are desirable. Floristic inventories and checklists should include new and relevant information on other aspects, such as conservation strategies and biogeographic patterns. The journal does not consider for publication submissions dealing exclusively with methods and protocols (including micropropagation) and biological activity of extracts with no detailed chemical analysis.