Genetic diversity of female clones of pointed gourd (Trichosanthes dioica Roxb.) based on multivariate analysis and inter simple sequence repeat (ISSR) marker

IF 1.6 3区 农林科学 Q2 AGRONOMY
Gayatri Sinha, Subhradeep Pramanik, Praveen Kumar Maurya, Rajdeep Guha Mallick, Debanjan Baul, Tridip Bhattacharjee, Swadesh Banerjee, Subrata Dutta, Soumitra Chatterjee, Asit Kumar Mandal, Ivi Chakraborty, Pranab Hazra, Arup Chattopadhyay
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Abstract

Pointed gourd (Trichosanthes dioica Roxb.) is a vegetatively propagated and an underutilised cucurbitaceous vegetable crop of India and Bangladesh. The crop has not yet been characterized based on distinctiveness, uniformity, and stability (DUS) characters. Clonal diversity has also not been properly assessed utilizing multivariate analysis and molecular marker. The present investigation was carried out to analyse genetic diversity of 34 female clones employing 29 qualitative and 27 quantitative characters for multivariate analysis and inter simple sequence repeat (ISSR) markers. Shannon–Wiener Diversity Index (H’) suggested that plant and fruit morphological characters viz., fruit shape, fruit apex shape at blossom end, number of secondary branches up to 20th node, leaf colour, petiole length, leaf blade length, vine length, fruit skin primary colour, and depth of leaf lobing should be considered when evaluating pointed gourd genotypes for DUS testing. The clones grouped in six clusters which do not correspond to origin locations. Principal components of variable traits for number of secondary branches up to 20th node, leaf blade length, leaf blade width, leaf blade size, petiole length, number of leaf lobes, vine length, node at which 1st female flower appeared, days to 50% flowering and fruit weight had eigen values > 1 and accounting for 81.06% of total variation. Based on average values, multivariate, and molecular analysis of economic traits, the female clones, ‘BCPG-4’ and ‘Swarna Alaukik’ emerged as potential and diverse genetic stocks for future breeding programme. Classification of the female clones and their diversity could conveniently be analysed using ISSR markers. We could frame the possible ways of future improvement strategies of pointed gourd.

Abstract Image

基于多元分析和简单序列重复标记(ISSR)的尖嘴葫芦(Trichosanthes dioica Roxb.)雌性克隆的遗传多样性
尖头葫芦(Trichosanthes dioica Roxb.)是一种无性繁殖的葫芦科蔬菜作物,在印度和孟加拉国未得到充分利用。该作物尚未根据独特性、均匀性和稳定性(DUS)特征进行定性。也没有利用多元分析和分子标记对克隆多样性进行适当评估。本研究采用 29 个定性特征和 27 个定量特征进行多元分析,并利用简单序列重复(ISSR)标记分析了 34 个雌性克隆的遗传多样性。香农-维纳多样性指数(H')表明,在评估尖嘴葫芦基因型进行 DUS 测试时,应考虑植物和果实的形态特征,即果实形状、花端果顶形状、第 20 节以下的二次分枝数、叶色、叶柄长度、叶片长度、藤蔓长度、果皮原色和叶裂深度。克隆分为六个群,与原产地不一致。第 20 节以下二次分枝数、叶片长度、叶片宽度、叶片大小、叶柄长度、叶裂片数、藤蔓长度、第 1 朵雌花出现的节位、50%开花天数和果重等变异性状的主成分特征值为 1,占总变异的 81.06%。根据经济性状的平均值、多变量和分子分析,雌性克隆 "BCPG-4 "和 "Swarna Alaukik "成为未来育种计划中具有潜力的多样化遗传种群。使用 ISSR 标记可以方便地分析雌性克隆的分类及其多样性。我们可以为尖头葫芦未来的改良战略制定可能的方法。
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来源期刊
Genetic Resources and Crop Evolution
Genetic Resources and Crop Evolution 农林科学-农艺学
CiteScore
4.10
自引率
10.00%
发文量
178
审稿时长
3 months
期刊介绍: Genetic Resources and Crop Evolution is devoted to all aspects of plant genetic resources research. It publishes original articles in the fields of taxonomical, morphological, physiological, biochemical, genetical, cytological or ethnobotanical research of genetic resources and includes contributions to gene-bank management in a broad sense, that means to collecting, maintenance, evaluation, storage and documentation. Areas of particular interest include: -crop evolution -domestication -crop-weed relationships -related wild species -history of cultivated plants including palaeoethnobotany. Genetic Resources and Crop Evolution also publishes short communications, e.g. newly described crop taxa, nomenclatural notes, reports of collecting missions, evaluation results of gene-bank material etc. as well as book reviews of important publications in the field of genetic resources. Every volume will contain some review articles on actual problems. The journal is the internationalized continuation of the German periodical Die Kulturpflanze, published formerly by the Institute of Plant Genetics and Crop Plant Research at Gatersleben, Germany. All contributions are in the English language and are subject to peer reviewing.
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