ATEC23 Challenge: Automated prediction of treatment effectiveness in ovarian cancer using histopathological images

IF 10.7 1区 医学 Q1 COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE
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Abstract

Ovarian cancer, predominantly epithelial ovarian cancer (EOC), is a global health concern due to its high mortality rate. Despite the progress made during the last two decades in the surgery and chemotherapy of ovarian cancer, more than 70% of advanced patients are with recurrent cancer and disease. Bevacizumab is a humanized monoclonal antibody, which blocks VEGF signaling in cancer, inhibits angiogenesis and causes tumor shrinkage, and has been recently approved by the FDA as a monotherapy for advanced ovarian cancer in combination with chemotherapy. Unfortunately, Bevacizumab may also induce harmful adverse effects, such as hypertension, bleeding, arterial thromboembolism, poor wound healing and gastrointestinal perforation. Given the expensive cost and unwanted toxicities, there is an urgent need for predictive methods to identify who could benefit from bevacizumab. Of the 18 (approved) requests from 5 countries, 6 teams using 284 whole section WSIs for training to develop fully automated systems submitted their predictions on a test set of 180 tissue core images, with the corresponding ground truth labels kept private. This paper summarizes the 5 qualified methods successfully submitted to the international challenge of automated prediction of treatment effectiveness in ovarian cancer using the histopathologic images (ATEC23) held at the 26th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI) in 2023 and evaluates the methods in comparison with 5 state of the art deep learning approaches. This study further assesses the effectiveness of the presented prediction models as indicators for patient selection utilizing both Cox proportional hazards analysis and Kaplan–Meier survival analysis. A robust and cost-effective deep learning pipeline for digital histopathology tasks has become a necessity within the context of the medical community. This challenge highlights the limitations of current MIL methods, particularly within the context of prognosis-based classification tasks, and the importance of DCNNs like inception that has nonlinear convolutional modules at various resolutions to facilitate processing the data in multiple resolutions, which is a key feature required for pathology related prediction tasks. This further suggests the use of feature reuse at various scales to improve models for future research directions. In particular, this paper releases the labels of the testing set and provides applications for future research directions in precision oncology to predict ovarian cancer treatment effectiveness and facilitate patient selection via histopathological images.

ATEC23 挑战赛:利用组织病理学图像自动预测卵巢癌的治疗效果
卵巢癌,主要是上皮性卵巢癌(EOC),因其死亡率高而成为全球关注的健康问题。尽管过去二十年来卵巢癌的手术和化疗取得了进展,但仍有超过 70% 的晚期患者癌症复发、病情恶化。贝伐珠单抗是一种人源化单克隆抗体,可阻断癌症中的血管内皮生长因子信号传导,抑制血管生成,使肿瘤缩小,最近已被美国食品及药物管理局批准作为晚期卵巢癌的单药疗法,与化疗联合使用。遗憾的是,贝伐单抗也可能诱发有害的不良反应,如高血压、出血、动脉血栓栓塞、伤口愈合不良和胃肠道穿孔。考虑到昂贵的费用和不必要的毒性,目前急需一种预测方法来确定哪些患者可以从贝伐单抗中获益。在来自 5 个国家的 18 项申请(已获批准)中,有 6 个团队使用了 284 张全切片 WSI 进行训练,以开发全自动系统,并提交了他们对 180 张组织核心图像测试集的预测,相应的基本真实标签不公开。本文总结了在 2023 年第 26 届国际医学影像计算和计算机辅助干预会议(MICCAI)上举行的利用组织病理图像自动预测卵巢癌治疗效果国际挑战赛(ATEC23)中成功提交的 5 种合格方法,并与 5 种最先进的深度学习方法进行了对比评估。本研究还利用 Cox 比例危险分析和 Kaplan-Meier 生存分析,进一步评估了所提出的预测模型作为患者选择指标的有效性。在医学界,为数字组织病理学任务提供一个强大且经济高效的深度学习管道已成为一种必然。这一挑战凸显了当前 MIL 方法的局限性,尤其是在基于预后的分类任务中,以及 DCNNs(如在不同分辨率下具有非线性卷积模块的萌芽)的重要性,它便于在多个分辨率下处理数据,而这正是病理学相关预测任务所需的关键特征。这进一步提出了在不同尺度上使用特征重用来改进模型的未来研究方向。本文特别发布了测试集的标签,并为精准肿瘤学的未来研究方向提供了应用,通过组织病理学图像预测卵巢癌治疗效果并促进患者选择。
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来源期刊
Medical image analysis
Medical image analysis 工程技术-工程:生物医学
CiteScore
22.10
自引率
6.40%
发文量
309
审稿时长
6.6 months
期刊介绍: Medical Image Analysis serves as a platform for sharing new research findings in the realm of medical and biological image analysis, with a focus on applications of computer vision, virtual reality, and robotics to biomedical imaging challenges. The journal prioritizes the publication of high-quality, original papers contributing to the fundamental science of processing, analyzing, and utilizing medical and biological images. It welcomes approaches utilizing biomedical image datasets across all spatial scales, from molecular/cellular imaging to tissue/organ imaging.
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