Vishal Srivastava, Sheetal Bandhu, Shivam Mishra, Tapan K. Chaudhuri
{"title":"Serratiopeptidase exhibits antibiofilm activity through the proteolytic function of N-terminal domain and versatile function of the C-terminal domain","authors":"Vishal Srivastava, Sheetal Bandhu, Shivam Mishra, Tapan K. Chaudhuri","doi":"10.1016/j.bbapap.2024.141046","DOIUrl":null,"url":null,"abstract":"<div><h3>Background</h3><p>Serratiopeptidase, a serine protease traditionally used as an oral anti-inflammatory drug has been found to show antibiofilm action. Structurally, it comprises of two distinct domains; viz-the N-terminal catalytic domain (N<em>cat</em>) and a C-terminal RTX (Repeat-In-Toxin) domain (C<em>rtx</em>). Understanding the antibiofilm action of the serratiopeptidase molecule, as well as the antibiofilm action of each of its two domains, was the objective of this study.</p></div><div><h3>Results</h3><p>Separate clones to express the complete recombinant serratiopeptidase protein and its variant containing a mutation in the catalytic site, the N-terminal catalytic domain and its mutant, and the C-terminal Repeat-In-Toxin domain were prepared, and the proteins were purified. The impact of these proteins on pre-existing biofilms, as well as their effect upon addition of these proteins during biofilm formation was investigated.</p></div><div><h3>Conclusions</h3><p>In our investigation, we have been able to analyze the antibiofilm action of serratiopeptidase in detail. Obtained results conclude that while N-terminally located proteolytic domain of serratiopeptidase conventionally acts against biofilms by hydrolytic activity, the C-terminal domain regulates or prevents biofilm formation by yet unknown mechanism in addition to its known function as an C-terminal located calcium modulated internal chaperone ensuring the proper folding and secretion of the molecule. The study's findings give new evidence that the C<em>rtx</em> domain plays a significant role in antibiofilm action. The proteolytic N<em>cat</em> domain breaks down pre-formed biofilms. The C-terminal domain, on the other hand, acts as an inhibitor of biofilm formation by regulating or preventing biofilm development.</p></div>","PeriodicalId":8760,"journal":{"name":"Biochimica et biophysica acta. Proteins and proteomics","volume":null,"pages":null},"PeriodicalIF":2.5000,"publicationDate":"2024-09-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S1570963924000530/pdfft?md5=3a4d2c38465f942f4b2f8b47b6076387&pid=1-s2.0-S1570963924000530-main.pdf","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biochimica et biophysica acta. Proteins and proteomics","FirstCategoryId":"99","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1570963924000530","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
引用次数: 0
Abstract
Background
Serratiopeptidase, a serine protease traditionally used as an oral anti-inflammatory drug has been found to show antibiofilm action. Structurally, it comprises of two distinct domains; viz-the N-terminal catalytic domain (Ncat) and a C-terminal RTX (Repeat-In-Toxin) domain (Crtx). Understanding the antibiofilm action of the serratiopeptidase molecule, as well as the antibiofilm action of each of its two domains, was the objective of this study.
Results
Separate clones to express the complete recombinant serratiopeptidase protein and its variant containing a mutation in the catalytic site, the N-terminal catalytic domain and its mutant, and the C-terminal Repeat-In-Toxin domain were prepared, and the proteins were purified. The impact of these proteins on pre-existing biofilms, as well as their effect upon addition of these proteins during biofilm formation was investigated.
Conclusions
In our investigation, we have been able to analyze the antibiofilm action of serratiopeptidase in detail. Obtained results conclude that while N-terminally located proteolytic domain of serratiopeptidase conventionally acts against biofilms by hydrolytic activity, the C-terminal domain regulates or prevents biofilm formation by yet unknown mechanism in addition to its known function as an C-terminal located calcium modulated internal chaperone ensuring the proper folding and secretion of the molecule. The study's findings give new evidence that the Crtx domain plays a significant role in antibiofilm action. The proteolytic Ncat domain breaks down pre-formed biofilms. The C-terminal domain, on the other hand, acts as an inhibitor of biofilm formation by regulating or preventing biofilm development.
背景:塞拉提肽酶是一种丝氨酸蛋白酶,传统上用作口服消炎药,现已发现它具有抗生物膜作用。从结构上看,它由两个不同的结构域组成,即 N 端催化结构域(Ncat)和 C 端 RTX(Repeat-In-Toxin)结构域。本研究的目的是了解血清肽酶分子的抗生物膜作用及其两个结构域各自的抗生物膜作用:结果:分别制备了表达完整重组血清拉提肽酶蛋白的克隆及其含有催化位点突变的变体、N端催化结构域及其突变体和C端重复毒素结构域,并纯化了这些蛋白。研究了这些蛋白质对已存在的生物膜的影响,以及在生物膜形成过程中加入这些蛋白质的影响:我们的研究详细分析了血清肽酶的抗生物膜作用。研究结果表明,血清拉提肽酶位于 N 端的蛋白水解结构域通常通过水解活性对生物膜起作用,而 C 端结构域除了作为位于 C 端的钙调节内部伴侣确保分子的正确折叠和分泌的已知功能外,还通过尚不清楚的机制调节或阻止生物膜的形成。研究结果提供了新的证据,证明 Crtx 结构域在抗生物膜作用中发挥着重要作用。蛋白水解 Ncat 结构域能分解预先形成的生物膜。而 C 端结构域则通过调节或阻止生物膜的形成,起到抑制生物膜形成的作用。
期刊介绍:
BBA Proteins and Proteomics covers protein structure conformation and dynamics; protein folding; protein-ligand interactions; enzyme mechanisms, models and kinetics; protein physical properties and spectroscopy; and proteomics and bioinformatics analyses of protein structure, protein function, or protein regulation.