On the shape of the simulated infrared spectral density of strongly hydrogen-bonded systems: Mapping and identification of Hadži ABC structure in phosphonic acid dimers in gas phase
{"title":"On the shape of the simulated infrared spectral density of strongly hydrogen-bonded systems: Mapping and identification of Hadži ABC structure in phosphonic acid dimers in gas phase","authors":"Najeh Rekik","doi":"10.1016/j.vibspec.2024.103730","DOIUrl":null,"url":null,"abstract":"<div><p>Herein, we explore the origin of three-peaked structure, referred to as the Hadži ABC structure, illustrated within the absorption bands in infrared (IR) spectra of strongly H-bonded systems. The exploration is particularly elucidated for two phosphinic acid dimers (<em>R</em><sub>2</sub><em>POOH</em>) in gas phase, namely bis-(iodomethyl)-phosphinic acid dimer (i.e., <em>R</em> = <em>CH</em><sub>2</sub><em>I</em>) at 465 K and dibutyl-phosphinic acid dimer (i.e., <em>R</em> = <em>C</em><sub>4</sub><em>H</em><sub>9</sub><em>O</em>) at 425 K. A direct theoretical illustration of this spectral signature, related predominantly to very strongly hydrogen bonded complexes, is proposed. The spectral density, <span><math><mrow><msub><mrow><mi>υ</mi></mrow><mrow><mi>S</mi></mrow></msub><mfenced><mrow><mi>O</mi><mo>−</mo><mi>H</mi></mrow></mfenced></mrow></math></span>,is determined by the aid of an approach describing the high-frequency <em>O</em> − <em>H</em> stretching modes by harmonic potentials. The intermolecular potential modes (<em>O</em>…<em>O</em>) are assumed to be of anharmonic nature. The approach is founded on the strong anharmonic coupling approximation, which prescribes a linear dependency of the <em>O</em> − <em>H</em> frequency on the <em>O</em>…<em>O</em> stretching coordinate as rationalized by the fundamental model of Maréchal and Witkowski. Both direct relaxation of the <em>O</em> − <em>H</em> vibrational mode and its homolog, indirect one, affecting the <em>O</em>…<em>O</em> stretching mode are taken into consideration. The model also considers Davydov coupling, which describes the mutual interaction that takes place in the centrosymmetric dimer between the two existent hydrogen bonds as well as Fermi resonances, which occur between the bending modes arising in- and out-of-plane of the dimer and the fundamental <em>O</em> − <em>H</em> stretching mode. Interestingly, we illustrate how the (<em>A</em>, <em>B</em>, and <em>C</em>) triplet detected in the IR absorption band of phosphonic acids can be generated and discuss how the ABC structure can be numerically simulated. The approach provides a direct explanation of the emergence of this unusual feature and mainly reveals that the <em>A</em> peak is due to the Davydov coupling mechanism, whereas the <em>BC</em> diad is found to be generated by Fermi resonances. This was elucidated in a distinctly different approach, rationalized by Sheppard and Claydon, affirming that the provenance of the <em>BC</em> diad is exclusively due to Fermi resonances mechanism. Altogether, our results highlight the congregated effects of both Fermi resonance mechanism and Davydov coupling for the formation of the <em>ABC</em> structure. The model paves the way for a deeper understanding of the <em>ABC</em> structure, characteristic of very toxic strongly hydrogen-bonded dimers. This is of capital importance as it allows one to develop a solid understanding of nerve agents, such as phosphonic acids, from theory alone, so as to avoid difficult and dangerous experiments since they are extremely toxic.</p></div>","PeriodicalId":23656,"journal":{"name":"Vibrational Spectroscopy","volume":"134 ","pages":"Article 103730"},"PeriodicalIF":2.7000,"publicationDate":"2024-08-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Vibrational Spectroscopy","FirstCategoryId":"92","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0924203124000833","RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"CHEMISTRY, ANALYTICAL","Score":null,"Total":0}
引用次数: 0
Abstract
Herein, we explore the origin of three-peaked structure, referred to as the Hadži ABC structure, illustrated within the absorption bands in infrared (IR) spectra of strongly H-bonded systems. The exploration is particularly elucidated for two phosphinic acid dimers (R2POOH) in gas phase, namely bis-(iodomethyl)-phosphinic acid dimer (i.e., R = CH2I) at 465 K and dibutyl-phosphinic acid dimer (i.e., R = C4H9O) at 425 K. A direct theoretical illustration of this spectral signature, related predominantly to very strongly hydrogen bonded complexes, is proposed. The spectral density, ,is determined by the aid of an approach describing the high-frequency O − H stretching modes by harmonic potentials. The intermolecular potential modes (O…O) are assumed to be of anharmonic nature. The approach is founded on the strong anharmonic coupling approximation, which prescribes a linear dependency of the O − H frequency on the O…O stretching coordinate as rationalized by the fundamental model of Maréchal and Witkowski. Both direct relaxation of the O − H vibrational mode and its homolog, indirect one, affecting the O…O stretching mode are taken into consideration. The model also considers Davydov coupling, which describes the mutual interaction that takes place in the centrosymmetric dimer between the two existent hydrogen bonds as well as Fermi resonances, which occur between the bending modes arising in- and out-of-plane of the dimer and the fundamental O − H stretching mode. Interestingly, we illustrate how the (A, B, and C) triplet detected in the IR absorption band of phosphonic acids can be generated and discuss how the ABC structure can be numerically simulated. The approach provides a direct explanation of the emergence of this unusual feature and mainly reveals that the A peak is due to the Davydov coupling mechanism, whereas the BC diad is found to be generated by Fermi resonances. This was elucidated in a distinctly different approach, rationalized by Sheppard and Claydon, affirming that the provenance of the BC diad is exclusively due to Fermi resonances mechanism. Altogether, our results highlight the congregated effects of both Fermi resonance mechanism and Davydov coupling for the formation of the ABC structure. The model paves the way for a deeper understanding of the ABC structure, characteristic of very toxic strongly hydrogen-bonded dimers. This is of capital importance as it allows one to develop a solid understanding of nerve agents, such as phosphonic acids, from theory alone, so as to avoid difficult and dangerous experiments since they are extremely toxic.
在此,我们探讨了强氢键体系红外光谱吸收带中的三峰结构(即哈德日 ABC 结构)的起源。该研究特别阐明了气相中的两种膦酸二聚体(R2POOH),即 465 K 时的双-(碘甲基)-膦酸二聚体(即 R = CH2I)和 425 K 时的二丁基-膦酸二聚体(即 R = C4H9O)。这种光谱特征主要与氢键非常强的复合物有关,我们提出了一种直接的理论说明。光谱密度 υSO-H 是通过谐波势描述高频 O - H 伸展模式的方法确定的。分子间势模(O...O)被假定为非谐波性质。这种方法建立在强非谐耦合近似的基础上,它规定了 O - H 频率与 O...O 伸展坐标的线性关系,正如 Maréchal 和 Witkowski 的基本模型所合理解释的那样。O - H 振动模式的直接弛豫和影响 O...O 伸展模式的同源间接弛豫都被考虑在内。该模型还考虑了戴维多夫耦合(Davydov coupling),它描述了中心对称二聚体中存在的两个氢键之间的相互影响,以及费米共振(发生在二聚体平面内外的弯曲模式和基本 O - H 拉伸模式之间)。有趣的是,我们说明了在膦酸的红外吸收带中检测到的(A、B 和 C)三重如何产生,并讨论了如何对 ABC 结构进行数值模拟。该方法直接解释了这一不寻常特征的出现,并主要揭示了 A 峰是由于达维多夫耦合机制产生的,而 BC 二重是由费米共振产生的。Sheppard 和 Claydon 用一种截然不同的方法阐明了这一点,并确认 BC 二重性的来源完全是费米共振机制。总之,我们的研究结果凸显了费米共振机制和达维多夫耦合对 ABC 结构形成的共同影响。该模型为深入理解具有剧毒强氢键二聚体特征的 ABC 结构铺平了道路。这一点非常重要,因为它可以让人们仅从理论上就对神经毒剂(如膦酸)有扎实的了解,从而避免进行困难和危险的实验,因为它们具有剧毒。
期刊介绍:
Vibrational Spectroscopy provides a vehicle for the publication of original research that focuses on vibrational spectroscopy. This covers infrared, near-infrared and Raman spectroscopies and publishes papers dealing with developments in applications, theory, techniques and instrumentation.
The topics covered by the journal include:
Sampling techniques,
Vibrational spectroscopy coupled with separation techniques,
Instrumentation (Fourier transform, conventional and laser based),
Data manipulation,
Spectra-structure correlation and group frequencies.
The application areas covered include:
Analytical chemistry,
Bio-organic and bio-inorganic chemistry,
Organic chemistry,
Inorganic chemistry,
Catalysis,
Environmental science,
Industrial chemistry,
Materials science,
Physical chemistry,
Polymer science,
Process control,
Specialized problem solving.