Biochemical and structural insights into the auto-inhibited state of Mical1 and its activation by Rab8

Amrita Rai, Petra Janning, Ingrid R. Vetter, Roger S. Goody
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Abstract

Mical1 regulates F-actin dynamics through the reversible oxidation of actin, a process controlled by its interactions with various proteins. Upon binding to Rab8 family members, Mical1 links endosomes to the cytoskeleton, promoting F-actin disassembly. In the absence of Rab, Mical1 exists in an auto-inhibited state, but its biochemical characterization remains incomplete. Our study reveals that the N-terminal MO-CH-LIM domains of Mical1 form an intramolecular complex with its C-terminal bMERB domain. Mutational analysis, guided by the AlphaFold2 model, identifies critical residues at the binding interface. Additionally, we demonstrate that full-length Mical1 binds to Rab8 in a 1:2 stoichiometry, thereby releasing auto-inhibition. Through structure-based mutational studies, we uncover allostery between the N and C-terminal Rab binding sites. Notably, Rab binding at the high-affinity C-terminal site precedes binding at the N-terminal site, suggesting a sequential binding mode. These findings elucidate how Rab8 binding releases the MO-CH-LIM domains from the Mical1 bMERB domain, facilitating interactions with other proteins and the actin cytoskeleton, thereby modulating actin dynamics.
Mical1的自动抑制状态及其被Rab8激活的生化和结构见解
Mical1 通过肌动蛋白的可逆氧化调节 F-肌动蛋白的动态,这一过程受其与各种蛋白质的相互作用控制。与 Rab8 家族成员结合后,Mical1 将内体与细胞骨架连接起来,促进 F-肌动蛋白的解体。在没有 Rab 的情况下,Mical1 处于自动抑制状态,但其生化特征描述仍不完整。我们的研究发现,Mical1 的 N 端 MO-CH-LIM 结构域与其 C 端 bMERB 结构域形成分子内复合物。以 AlphaFold2 模型为指导的突变分析确定了结合界面上的关键残基。此外,我们还证明了全长 Mical1 与 Rab8 的结合比例为 1:2,从而释放了自动抑制作用。通过基于结构的突变研究,我们发现了 N 端和 C 端 Rab 结合位点之间的异位。值得注意的是,Rab 与高亲和力 C 端位点的结合先于与 N 端位点的结合,这表明这是一种顺序结合模式。这些发现阐明了 Rab8 结合如何从 Mical1 bMERB 结构域中释放 MO-CH-LIM 结构域,从而促进与其他蛋白质和肌动蛋白细胞骨架的相互作用,进而调节肌动蛋白的动力学。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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