Joshua T. Derrick, Steven A. Farber, William B. Ludington
{"title":"PeakClimber: A software tool for analyzing biological HPLC data using the exponential Gaussian function","authors":"Joshua T. Derrick, Steven A. Farber, William B. Ludington","doi":"10.1101/2024.08.05.606689","DOIUrl":null,"url":null,"abstract":"High-performance liquid chromatography (HPLC) is a common medium-throughput technique to analyze metabolic samples. However, analysis of HPLC data is hampered by a lack of tools to accurately determine the precise analyte quantities on a level of precision equivalent to mass-spectrometry approaches. To combat this problem, we developed a tool we call PeakClimber, that uses a sum of exponential Gaussian functions to accurately quantify the peaks in HPLC traces. In this paper we analytically show that HPLC peaks are well-fit by an exponential Gaussian function, that PeakClimber more accurately quantifies known peak areas than standard industry software and utilize PeakClimber to make new discoveries about lipid biology.","PeriodicalId":501308,"journal":{"name":"bioRxiv - Bioengineering","volume":"8 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2024-08-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"bioRxiv - Bioengineering","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1101/2024.08.05.606689","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
Abstract
High-performance liquid chromatography (HPLC) is a common medium-throughput technique to analyze metabolic samples. However, analysis of HPLC data is hampered by a lack of tools to accurately determine the precise analyte quantities on a level of precision equivalent to mass-spectrometry approaches. To combat this problem, we developed a tool we call PeakClimber, that uses a sum of exponential Gaussian functions to accurately quantify the peaks in HPLC traces. In this paper we analytically show that HPLC peaks are well-fit by an exponential Gaussian function, that PeakClimber more accurately quantifies known peak areas than standard industry software and utilize PeakClimber to make new discoveries about lipid biology.