How to Shift the Equilibrium of DNA Break Repair in Favor of Homologous Recombination

IF 1.5 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY
O. A. Averina, S. A. Kuznetsova, O. A. Permyakov, P. V. Sergiev
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Abstract

The CRISPR/Cas technology of targeted genome editing made it possible to carry out genetic engineering manipulations with eukaryotic genomes with a high efficiency. Targeted induction of site-specific DNA breaks is one of the key stages of the technology. The cell repairs the breaks via one of the two pathways, nonhomologous end joining (NHEJ) and homology-driven repair (HDR). The choice of the DNA repair pathway is determined by the architecture of the DNA break region formed as a result of terminal resection and depends on the cell cycle phase. NHEJ is the main pathway of double-strand break (DSB) repair in mammalian cells and involves a nonspecific ligation reaction. The reaction accuracy depends on the structure of break ends, and various insertions or deletions may arise as a result in the target genome region. Integration of a necessary sequence into the genome occurs via HDR, which requires a template with homology regions flanking a DSB. Introducing a genetic construct into a particular genomic locus is an important task, but is currently intricate and laborious to perform. However, the choice of the repair pathway can be of principal importance for basic research of gene functions and construction of animal models of human diseases to develop therapies. The review summarizes and systematizes the available information on strategies designed to increase the HDR efficiency. The strategies that most efficiently shift the balance towards HDR include use of NHEJ inhibitors, regulation of the key factors of homologous recombination, control of the cell cycle and chromatin status, and construction of HDR templates.

Abstract Image

如何使 DNA 断裂修复的平衡有利于同源重组
摘要CRISPR/Cas靶向基因组编辑技术使得对真核生物基因组进行高效基因工程操作成为可能。有针对性地诱导特定位点的 DNA 断裂是该技术的关键阶段之一。细胞通过非同源末端连接(NHEJ)和同源驱动修复(HDR)两种途径之一修复断裂。DNA 修复途径的选择由末端切除形成的 DNA 断裂区域的结构决定,并取决于细胞周期阶段。NHEJ 是哺乳动物细胞中双链断裂(DSB)修复的主要途径,涉及非特异性连接反应。反应的准确性取决于断裂末端的结构,目标基因组区域可能因此出现各种插入或缺失。通过 HDR 将必要的序列整合到基因组中,这需要在 DSB 侧面有同源区的模板。将基因构建体导入特定的基因组位点是一项重要的任务,但目前的操作复杂而费力。然而,修复途径的选择对于基因功能的基础研究和构建人类疾病的动物模型以开发疗法具有重要意义。本综述对旨在提高 HDR 效率的策略的现有信息进行了总结和系统化。最有效地将平衡转向 HDR 的策略包括使用 NHEJ 抑制剂、调节同源重组的关键因素、控制细胞周期和染色质状态以及构建 HDR 模板。
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来源期刊
Molecular Biology
Molecular Biology 生物-生化与分子生物学
CiteScore
1.30
自引率
8.30%
发文量
78
审稿时长
3 months
期刊介绍: Molecular Biology is an international peer reviewed journal that covers a wide scope of problems in molecular, cell and computational biology including genomics, proteomics, bioinformatics, molecular virology and immunology, molecular development biology, molecular evolution and related areals. Molecular Biology publishes reviews, experimental and theoretical works. Every year, the journal publishes special issues devoted to most rapidly developing branches of physical-chemical biology and to the most outstanding scientists.
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