Two TAL effectors of Xanthomonas citri pv. malvacearum target GhSWEET15 as the susceptibility genes for bacterial blight of cotton

bioRxiv Pub Date : 2024-08-08 DOI:10.1101/2024.08.06.606744
Syed Mashab Ali Shah, Fazal Haq, Kunxuan Huang, Qi Wang, Linlin Liu, Ying Li, Yong Wang, Asaf Khan, Ruihuan Yang, M. Khojasteh, Xiameng Xu, Zhengyin Xu, Gongyou Chen
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Abstract

Bacterial Blight of Cotton (BBC) caused by Xanthomonas citri pv. malvacearum (Xcm) is an important and destructive disease affecting cotton plants. Transcription activator-like effectors (TALEs) released by the pathogen regulate cotton resistance to the susceptibility. In this study, we sequenced the whole genome of Xcm Xss-V2-18 and identified eight tal genes; seven on the plasmids and one on the chromosome. Deletion and complementation experiments of Xss-V2-18 tal genes demonstrated that Tal1b is required for full virulence on cotton. Transcriptome profiling coupled with TALE-binding element prediction revealed that Tal1b targets GhSWEET15A04/D04 and GhSWEET15D02 simultaneously. Expression analysis confirmed the independent inducibility of GhSWEET15A04/D04 and GhSWEET15D02 by Tal1b, whereas GhSWEET15A04/D04 is additionally targeted by Tal1. Moreover, GUS (β-glucuronidase) and Xa10-mediated HR (hypersensitive response) assays indicated that the EBEs are required for the direct and specific activation of the candidate targets by Tal1 and Ta1b. These findings may advance our understanding of the dynamics between TALEs and EBEs, and decipher a simple and effective DNA-binding mechanism that could lead to the development of more efficient methods for gene editing and transgenic research.
柠檬黄单胞菌 (Xanthomonas citri pv. malvacearum) 的两个 TAL 效应器以 GhSWEET15 为目标,作为棉花细菌性枯萎病的易感基因
由柠檬黄单胞菌(Xanthomonas citri pv. malvacearum,Xcm)引起的棉花细菌性疫病(Bacterial Blight of Cotton,BBC)是影响棉花植株的一种重要的破坏性病害。病原体释放的转录激活剂样效应子(TALEs)可调节棉花的抗病性和易感性。在这项研究中,我们对 Xcm Xss-V2-18 的全基因组进行了测序,发现了 8 个 tal 基因,其中 7 个在质粒上,1 个在染色体上。Xss-V2-18 tal 基因的缺失和互补实验表明,Tal1b 是棉花上完全毒力所必需的。转录组分析和 TALE 结合元件预测显示,Tal1b 同时以 GhSWEET15A04/D04 和 GhSWEET15D02 为靶标。表达分析证实了 Tal1b 对 GhSWEET15A04/D04 和 GhSWEET15D02 的独立诱导性,而 GhSWEET15A04/D04 则是 Tal1 的额外靶标。此外,GUS(β-葡糖醛酸酶)和 Xa10 介导的 HR(超敏反应)测定表明,Tal1 和 Ta1b 直接特异性激活候选靶标需要 EBE。这些发现可能会促进我们对 TALEs 和 EBEs 之间动态的了解,并破译一种简单有效的 DNA 结合机制,从而开发出更有效的基因编辑和转基因研究方法。
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