Further evaluation of the shape of atomic Hirshfeld surfaces: M...H contacts and homoatomic bonds.

IF 0.7 4区 化学 Q4 CHEMISTRY, MULTIDISCIPLINARY
Camila B Pinto, Leonardo H R Dos Santos, Bernardo L Rodrigues
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引用次数: 0

Abstract

It is well known that Hirshfeld surfaces provide an easy and straightforward way of analysing intermolecular interactions in the crystal environment. The use of atomic Hirshfeld surfaces has also demonstrated that such surfaces carry information related to chemical bonds which allow a deeper evaluation of the structures. Here we briefly summarize the approach of atomic Hirshfeld surfaces while further evaluating the kind of information that can be retrieved from them. We show that the analysis of the metal-centre Hirshfeld surfaces from structures refined via Hirshfeld Atom Refinement (HAR) allow accurate evaluation of contacts of type M...H, and that such contacts can be related to the overall shape of the surfaces. The compounds analysed were tetraaquabis(3-carboxypropionato)metal(II), [M(C4H3O4)2(H2O)4], for metal(II)/M = manganese/Mn, cobalt/Co, nickel/Ni and zinc/Zn. We also evaluate the sensitivity of the surfaces by an investigation of seemingly flat surfaces through analysis of the curvature functions in the direction of C-C bonds. The obtained values not only demonstrate variations in curvature but also show a correlation with the hybridization of the C atoms involved in the bond.

进一步评估原子 Hirshfeld 表面的形状:M...H接触和同原子键。
众所周知,Hirshfeld 表面为分析晶体环境中的分子间相互作用提供了一种简单直接的方法。原子 Hirshfeld 表面的使用还表明,这种表面携带与化学键有关的信息,可以对结构进行更深入的评估。在此,我们简要总结了原子 Hirshfeld 表面的研究方法,同时进一步评估了可从中获取的信息种类。我们的研究表明,通过 Hirshfeld Atom Refinement (HAR) 精炼结构的金属中心 Hirshfeld 表面分析,可以准确评估 M...H 类型的接触,而且这种接触可以与表面的整体形状相关联。分析的化合物是四喹喔啉(3-羧基丙酸)金属(II)[M(C4H3O4)2(H2O)4],金属(II)/M = 锰/锰、钴/钴、镍/镍和锌/锌。我们还通过分析 C-C 键方向的曲率函数,对看似平整的表面进行了研究,从而评估了表面的敏感性。所获得的数值不仅显示了曲率的变化,还显示了与键中涉及的 C 原子杂化的相关性。
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来源期刊
Acta Crystallographica Section C Structural Chemistry
Acta Crystallographica Section C Structural Chemistry CHEMISTRY, MULTIDISCIPLINARYCRYSTALLOGRAPH-CRYSTALLOGRAPHY
CiteScore
1.60
自引率
12.50%
发文量
148
期刊介绍: Acta Crystallographica Section C: Structural Chemistry is continuing its transition to a journal that publishes exciting science with structural content, in particular, important results relating to the chemical sciences. Section C is the journal of choice for the rapid publication of articles that highlight interesting research facilitated by the determination, calculation or analysis of structures of any type, other than macromolecular structures. Articles that emphasize the science and the outcomes that were enabled by the study are particularly welcomed. Authors are encouraged to include mainstream science in their papers, thereby producing manuscripts that are substantial scientific well-rounded contributions that appeal to a broad community of readers and increase the profile of the authors.
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