Optimizing Archaeal Lipid Biosynthesis in Escherichia coli.

IF 3.9 2区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS
ACS Synthetic Biology Pub Date : 2024-08-16 Epub Date: 2024-08-03 DOI:10.1021/acssynbio.4c00235
Mirthe Hoekzema, Jiayi Jiang, Arnold J M Driessen
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引用次数: 0

Abstract

Membrane lipid chemistry is remarkably different in archaea compared with bacteria and eukaryotes. In the evolutionary context, this is also termed the lipid divide and is reflected by distinct biosynthetic pathways. Contemporary organisms have almost without exception only one type of membrane lipid. During early membrane evolution, mixed membrane stages likely occurred, and it was hypothesized that the instability of such mixtures was the driving force for the lipid divide. To examine the compatibility between archaeal and bacterial lipids, the bacterium Escherichia coli has been engineered to contain both types of lipids with varying success. Only limited production of archaeal lipid archaetidylethanolamine was achieved. Here, we substantially increased its production in E. coli by overexpression of an archaeal phosphatidylserine synthase needed for ethanolamine headgroup attachment. Furthermore, we introduced a synthetic isoprenoid utilization pathway to increase the supply of isopentenyl-diphosphate and dimethylallyl diphosphate. This improved archaeal lipid production substantially. The archaeal phospholipids also served as a substrate for the E. coli cardiolipin synthase, resulting in archaeal and novel hybrid archaeal/bacterial cardiolipin species not seen in living organisms before. Growth of the E. coli strain with the mixed membrane shows an enhanced sensitivity to the inhibitor of fatty acid biosynthesis, cerulenin, indicating a critical dependence of the engineered E. coli strain on its native phospholipids.

Abstract Image

优化大肠杆菌中的古脂质生物合成。
与细菌和真核生物相比,古菌的膜脂化学性质明显不同。在进化过程中,这也被称为 "脂质分裂",并通过不同的生物合成途径反映出来。当代生物几乎无一例外地只有一种膜脂。在早期的膜进化过程中,可能会出现混合膜阶段,据推测,这种混合物的不稳定性是脂质分化的驱动力。为了研究考古脂质和细菌脂质之间的兼容性,人们改造了大肠杆菌,使其同时含有两种类型的脂质,但取得的成功各不相同。我们只能有限地生产古菌脂质古乙酰乙醇胺。在这里,我们通过过量表达乙醇胺头基附着所需的古生磷脂酰丝氨酸合成酶,大幅提高了乙醇胺在大肠杆菌中的产量。此外,我们还引入了合成异戊烯利用途径,以增加异戊烯基二磷酸和二甲基烯丙基二磷酸的供应。这大大提高了古菌脂质的产量。古菌磷脂还可作为大肠杆菌心磷脂合成酶的底物,从而产生古菌和新型古菌/细菌杂交心磷脂物种,这在生物体内是前所未有的。带有混合膜的大肠杆菌菌株在生长过程中对脂肪酸生物合成抑制剂脑磷脂的敏感性有所提高,这表明工程大肠杆菌菌株对其本地磷脂具有关键的依赖性。
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来源期刊
CiteScore
8.00
自引率
10.60%
发文量
380
审稿时长
6-12 weeks
期刊介绍: The journal is particularly interested in studies on the design and synthesis of new genetic circuits and gene products; computational methods in the design of systems; and integrative applied approaches to understanding disease and metabolism. Topics may include, but are not limited to: Design and optimization of genetic systems Genetic circuit design and their principles for their organization into programs Computational methods to aid the design of genetic systems Experimental methods to quantify genetic parts, circuits, and metabolic fluxes Genetic parts libraries: their creation, analysis, and ontological representation Protein engineering including computational design Metabolic engineering and cellular manufacturing, including biomass conversion Natural product access, engineering, and production Creative and innovative applications of cellular programming Medical applications, tissue engineering, and the programming of therapeutic cells Minimal cell design and construction Genomics and genome replacement strategies Viral engineering Automated and robotic assembly platforms for synthetic biology DNA synthesis methodologies Metagenomics and synthetic metagenomic analysis Bioinformatics applied to gene discovery, chemoinformatics, and pathway construction Gene optimization Methods for genome-scale measurements of transcription and metabolomics Systems biology and methods to integrate multiple data sources in vitro and cell-free synthetic biology and molecular programming Nucleic acid engineering.
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