Dimensional reduction and adaptation-development-evolution relation in evolved biological systems

Kunihiko Kaneko
{"title":"Dimensional reduction and adaptation-development-evolution relation in evolved biological systems","authors":"Kunihiko Kaneko","doi":"arxiv-2407.19168","DOIUrl":null,"url":null,"abstract":"Life systems are complex and hierarchical, with diverse components at\ndifferent scales, yet they sustain themselves, grow, and evolve over time. How\ncan a theory of such complex biological states be developed? Here we note that\nfor a hierarchical biological system to be robust, it must achieve consistency\nbetween micro-scale (e.g. molecular) and macro-scale (e.g. cellular) phenomena.\nThis allows for a universal theory of adaptive change in cells based on\nbiological robustness and consistency between cellular growth and molecular\nreplication. Here, we show how adaptive changes in high-dimensional phenotypes\n(biological states) are constrained to low-dimensional space, leading to the\nderivation of a macroscopic law for cellular states. The theory is then\nextended to evolution, leading to proportionality between evolutionary and\nenvironmental responses, as well as proportionality between phenotypic\nvariances due to noise and due to genetic changes. The universality of the\nresults across several models and experiments is demonstrated. Then, by further\nextending the theory of evolutionary dimensional reduction to multicellular\nsystems, the relationship between multicellular development and evolution, in\nparticular the developmental hourglass, is demonstrated. Finally, the\npossibility of collapse of dimensional reduction under nutrient limitation is\ndiscussed.","PeriodicalId":501040,"journal":{"name":"arXiv - PHYS - Biological Physics","volume":null,"pages":null},"PeriodicalIF":0.0000,"publicationDate":"2024-07-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"arXiv - PHYS - Biological Physics","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/arxiv-2407.19168","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0

Abstract

Life systems are complex and hierarchical, with diverse components at different scales, yet they sustain themselves, grow, and evolve over time. How can a theory of such complex biological states be developed? Here we note that for a hierarchical biological system to be robust, it must achieve consistency between micro-scale (e.g. molecular) and macro-scale (e.g. cellular) phenomena. This allows for a universal theory of adaptive change in cells based on biological robustness and consistency between cellular growth and molecular replication. Here, we show how adaptive changes in high-dimensional phenotypes (biological states) are constrained to low-dimensional space, leading to the derivation of a macroscopic law for cellular states. The theory is then extended to evolution, leading to proportionality between evolutionary and environmental responses, as well as proportionality between phenotypic variances due to noise and due to genetic changes. The universality of the results across several models and experiments is demonstrated. Then, by further extending the theory of evolutionary dimensional reduction to multicellular systems, the relationship between multicellular development and evolution, in particular the developmental hourglass, is demonstrated. Finally, the possibility of collapse of dimensional reduction under nutrient limitation is discussed.
进化生物系统中的降维与适应-发展-进化关系
生命系统是复杂而有层次的,在不同的尺度上有不同的组成部分,但它们却能自我维持、成长,并随着时间的推移而不断进化。如何才能发展出关于这种复杂生物状态的理论呢?在这里,我们注意到,要使一个分级生物系统具有稳健性,它必须在微观尺度(如分子)和宏观尺度(如细胞)现象之间实现一致性。这使得基于生物学稳健性和细胞生长与分子复制之间一致性的细胞适应性变化的普遍理论成为可能。在这里,我们展示了高维表型(生物状态)的适应性变化如何受限于低维空间,从而衍生出细胞状态的宏观规律。这一理论被扩展到进化论中,导致了进化反应和环境反应之间的比例关系,以及噪声导致的表型变化和遗传变化导致的表型变化之间的比例关系。研究证明了这些结果在多个模型和实验中的普遍性。然后,通过将进化降维理论进一步扩展到多细胞系统,证明了多细胞发育与进化之间的关系,特别是发育沙漏。最后,讨论了在营养限制条件下降维崩溃的可能性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信