GENETIC TESTING FOR EARLY DETECTION AND PREVENTION OF HEREDITARY DISORDERS

P. Charan Teja Reddy, Dr. Ravi Dandu
{"title":"GENETIC TESTING FOR EARLY DETECTION AND PREVENTION OF HEREDITARY DISORDERS","authors":"P. Charan Teja Reddy, Dr. Ravi Dandu","doi":"10.36713/epra17731","DOIUrl":null,"url":null,"abstract":"This research aims at assessing the efficacy of genetic testing in the early diagnosis and prevention of hereditary ailments Such prospects can be realize with the aid of modern machine learning algorithms. Using a set of genetic disorder tests as the data, a number of models, such as Auto_ViML – an automated machine learning model, and RandomForestClassifier, are deployed and tested to classify possible presence of genetic disorders. In order to overcome the issues these different classes pose as a large imbalance in the number of instances between the classes, we use SMOTE or the Synthetic Minority Over-sampling Technique in order to counterbalance the classes and hence make the calculations and the overall resultant models more accurate. This step is important in managing the given skewed data set characteristic to genetic disorders that more often possess fewer positive samples than negative ones. \n Also, for the purpose of explaining the models we employ LIME method that allows for the local model-agnostic explanation and provides an insight into how these black-box methods make decisions. The use of LIME allows the results of the machine learning models to be interpretable by the physicians, hence making them to trust the results of the models and or implement them into their practice. This paper emphasizes the importance of this feature to make the system more acceptable among practitioners who have to explain diagnoses and treatment plans to the patients. \n The findings revealed the prospects of automation in improving the conduct of screening for genetic disorders. Combining more sophisticated machine learning instruments with interpretability methodologies, our solution enables efficient detection of patients’ condition changes and contributes to their better health outcomes due to timely interventions and more precise treatment plans. The results call for the further integration of genomic tests and complex machine learning approaches to derive precise models that are implementable in clinical settings while being easy to explain.\nKEYWORDS: Network Intrusion Detection, UNSW-NB15, CIC-IDS2017, Packet Capture (PCAP), Machine Learning, Data Preprocessing, Feature Selection","PeriodicalId":114964,"journal":{"name":"EPRA International Journal of Research & Development (IJRD)","volume":"114 42","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2024-07-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"EPRA International Journal of Research & Development (IJRD)","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.36713/epra17731","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0

Abstract

This research aims at assessing the efficacy of genetic testing in the early diagnosis and prevention of hereditary ailments Such prospects can be realize with the aid of modern machine learning algorithms. Using a set of genetic disorder tests as the data, a number of models, such as Auto_ViML – an automated machine learning model, and RandomForestClassifier, are deployed and tested to classify possible presence of genetic disorders. In order to overcome the issues these different classes pose as a large imbalance in the number of instances between the classes, we use SMOTE or the Synthetic Minority Over-sampling Technique in order to counterbalance the classes and hence make the calculations and the overall resultant models more accurate. This step is important in managing the given skewed data set characteristic to genetic disorders that more often possess fewer positive samples than negative ones. Also, for the purpose of explaining the models we employ LIME method that allows for the local model-agnostic explanation and provides an insight into how these black-box methods make decisions. The use of LIME allows the results of the machine learning models to be interpretable by the physicians, hence making them to trust the results of the models and or implement them into their practice. This paper emphasizes the importance of this feature to make the system more acceptable among practitioners who have to explain diagnoses and treatment plans to the patients. The findings revealed the prospects of automation in improving the conduct of screening for genetic disorders. Combining more sophisticated machine learning instruments with interpretability methodologies, our solution enables efficient detection of patients’ condition changes and contributes to their better health outcomes due to timely interventions and more precise treatment plans. The results call for the further integration of genomic tests and complex machine learning approaches to derive precise models that are implementable in clinical settings while being easy to explain. KEYWORDS: Network Intrusion Detection, UNSW-NB15, CIC-IDS2017, Packet Capture (PCAP), Machine Learning, Data Preprocessing, Feature Selection
用于早期发现和预防遗传性疾病的基因检测
这项研究旨在评估基因检测在早期诊断和预防遗传性疾病方面的功效。 借助现代机器学习算法,可以实现这样的前景。本研究使用一组遗传疾病检测数据,部署并测试了一些模型,如自动机器学习模型 Auto_ViML 和 RandomForestClassifier,以对可能存在的遗传疾病进行分类。为了克服这些不同类别之间实例数量严重不平衡所带来的问题,我们使用了 SMOTE 或合成少数群体过度采样技术来平衡类别,从而使计算和整体结果模型更加准确。这一步骤对于处理遗传疾病特有的偏斜数据集非常重要,因为遗传疾病的阳性样本往往少于阴性样本。 此外,为了解释模型,我们还采用了 LIME 方法,这种方法可以对局部模型进行解释,并让人们了解这些黑箱方法是如何做出决策的。使用 LIME 可以让医生解释机器学习模型的结果,从而使他们相信模型的结果,或将其应用到实践中。本文强调了这一功能的重要性,它使系统更容易被需要向病人解释诊断和治疗方案的医生所接受。 研究结果揭示了自动化在改善遗传疾病筛查方面的前景。我们的解决方案将更复杂的机器学习工具与可解释性方法相结合,能有效检测出患者的病情变化,并通过及时干预和更精确的治疗方案改善患者的健康状况。研究结果呼吁进一步整合基因组测试和复杂的机器学习方法,以推导出既可在临床环境中实施又易于解释的精确模型。 关键词:网络入侵检测、UNSW-NB15、CIC-IDS2017、数据包捕获(PCAP)、机器学习、数据预处理、特征选择
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信