Time-Resolved Ion Mobility-Mass Spectrometry Reveals Structural Transitions in the Disassembly of Modular Polyketide Syntheses.

IF 3.1 2区 化学 Q2 BIOCHEMICAL RESEARCH METHODS
Chunyi Zhao, Samuel T Slocum, David H Sherman, Brandon T Ruotolo
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引用次数: 0

Abstract

The type 1 polyketide synthase (PKS) assembly line uses its modular structure to produce polyketide natural products that form the basis of many pharmaceuticals. Currently, several cryoelectron microscopy (cryo-EM) structures of a multidomain PKS module have been constructed, but much remains to be learned. Here we utilize ion-mobility mass spectrometry (IM-MS) to record size and shape information and detect different conformational states of a 207 kDa didomain dimer comprised of ketosynthase (KS) and acyl transferase (AT), excised from full-length module. Furthermore, gas-phase stability differences between these different conformations are captured by collision induced unfolding (CIU) technology. Additionally, through tracking these forms as a function of time, we elucidate a detailed disassembly pathway for KS-AT dimers for the first time.

Abstract Image

时间分辨离子迁移质谱法揭示模块化多酮合成分解过程中的结构转变
1 型多酮苷合成酶(PKS)装配线利用其模块化结构生产多酮苷天然产物,这些天然产物是许多药物的基础。目前,人们已经构建了几种多域 PKS 模块的冷冻电子显微镜(cryo-EM)结构,但仍有许多知识有待了解。在这里,我们利用离子迁移质谱法(IM-MS)记录大小和形状信息,并检测从全长模块中切除的由酮合成酶(KS)和酰基转移酶(AT)组成的 207 kDa 二聚体的不同构象状态。此外,碰撞诱导解折(CIU)技术还捕捉到了这些不同构象之间的气相稳定性差异。此外,通过追踪这些构象的时间函数,我们首次阐明了 KS-AT 二聚体的详细分解途径。
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来源期刊
CiteScore
5.50
自引率
9.40%
发文量
257
审稿时长
1 months
期刊介绍: The Journal of the American Society for Mass Spectrometry presents research papers covering all aspects of mass spectrometry, incorporating coverage of fields of scientific inquiry in which mass spectrometry can play a role. Comprehensive in scope, the journal publishes papers on both fundamentals and applications of mass spectrometry. Fundamental subjects include instrumentation principles, design, and demonstration, structures and chemical properties of gas-phase ions, studies of thermodynamic properties, ion spectroscopy, chemical kinetics, mechanisms of ionization, theories of ion fragmentation, cluster ions, and potential energy surfaces. In addition to full papers, the journal offers Communications, Application Notes, and Accounts and Perspectives
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