{"title":"Bifurcations and nonlinear dynamics of the follower force model for active filaments","authors":"Bethany Clarke, Yongyun Hwang, Eric E. Keaveny","doi":"10.1103/physrevfluids.9.073101","DOIUrl":null,"url":null,"abstract":"Biofilament-motor protein complexes are ubiquitous in biology and drive the transport of cargo vital for many fundamental life processes at the cellular level. As they move, motor proteins exert compressive forces on the filaments to which they are attached. If the filament is clamped or tethered in some way, this force leads to buckling and a subsequent range of dynamics. The follower force model, in which a single compressive force is imposed at the filament tip, is a simple filament model that is becoming widely used to describe an elastic filament, such as a microtubule, compressed by a motor protein. Depending on the force value, one can observe different states including whirling, beating, and writhing, though the bifurcations giving rise to these states are not completely understood. In this paper, we utilize techniques from computational dynamical systems to determine and characterize these bifurcations. We track emerging time-periodic branches and identify quasiperiodic states. We investigate the effect of filament slenderness on the bifurcations and, in doing so, present a comprehensive overview of the dynamics which emerge in the follower force model.","PeriodicalId":20160,"journal":{"name":"Physical Review Fluids","volume":"131 1","pages":""},"PeriodicalIF":2.5000,"publicationDate":"2024-07-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Physical Review Fluids","FirstCategoryId":"101","ListUrlMain":"https://doi.org/10.1103/physrevfluids.9.073101","RegionNum":3,"RegionCategory":"物理与天体物理","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"PHYSICS, FLUIDS & PLASMAS","Score":null,"Total":0}
引用次数: 0
Abstract
Biofilament-motor protein complexes are ubiquitous in biology and drive the transport of cargo vital for many fundamental life processes at the cellular level. As they move, motor proteins exert compressive forces on the filaments to which they are attached. If the filament is clamped or tethered in some way, this force leads to buckling and a subsequent range of dynamics. The follower force model, in which a single compressive force is imposed at the filament tip, is a simple filament model that is becoming widely used to describe an elastic filament, such as a microtubule, compressed by a motor protein. Depending on the force value, one can observe different states including whirling, beating, and writhing, though the bifurcations giving rise to these states are not completely understood. In this paper, we utilize techniques from computational dynamical systems to determine and characterize these bifurcations. We track emerging time-periodic branches and identify quasiperiodic states. We investigate the effect of filament slenderness on the bifurcations and, in doing so, present a comprehensive overview of the dynamics which emerge in the follower force model.
期刊介绍:
Physical Review Fluids is APS’s newest online-only journal dedicated to publishing innovative research that will significantly advance the fundamental understanding of fluid dynamics. Physical Review Fluids expands the scope of the APS journals to include additional areas of fluid dynamics research, complements the existing Physical Review collection, and maintains the same quality and reputation that authors and subscribers expect from APS. The journal is published with the endorsement of the APS Division of Fluid Dynamics.