Characterizing carbapenemase production in Enterobacterales through combined disk test and genetic profiling

Shuchita Gaur, Rupam Gahlot, Nikita Sherwani, Suchita Netam, Sneha Dadarya
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Abstract

: Carbapenem-resistant  (CRE) are major organisms amongst the critical group of drug-resistant bacteria and are associated with high morbidity and mortality. With limited treatment options, the detection and characterization of carbapenemase is important for appropriate management. This study aims to characterize carbapenemase produced by  using combined disk test and their molecular profiling. : All carbapenem-resistant isolated from various clinical samples were included in the study. Carbapenemase production was characterized by observing synergy on combining meropenem disk with beta-lactamase inhibitors like phenylboronic acid, EDTA, and cloxacillin, following which genetic profiling was done using multiplex PCR.: Out of 445  isolated, 104 (23.4%) were carbapenem-resistant. The most common CRE isolated was  (62 out of 104) followed by  (40 out of 104) and 2 out of 104 CRE isolates were  species. Co-production of NDM and OXA-48-like enzymes (39.4%) was the most common mechanism followed by NDM alone (19.2%) and OXA-48 alone (16.3%). NDM was the most common gene detected overall with 72 out of 104 CRE (69.2%) isolates showing its presence, followed by OXA-48 present in 63 of 104 (60.6%) isolates.: Metallo-beta-lactamases (NDM) was the predominant type of carbapenemase gene detected among the isolates, with the co-production of NDM and OXA-48 enzymes being the most common mechanism of resistance.
通过结合磁盘测试和基因图谱分析确定肠杆菌科细菌碳青霉烯酶产生的特征
:耐碳青霉烯类细菌(CRE)是耐药细菌关键群体中的主要细菌,与高发病率和高死亡率有关。由于治疗方案有限,检测和鉴定碳青霉烯酶对适当的治疗非常重要。本研究旨在通过使用联合磁盘测试及其分子谱分析来确定碳青霉烯酶产生的特征。 研究对象包括从各种临床样本中分离出的所有耐碳青霉烯酶细菌。通过观察美罗培南盘与β-内酰胺酶抑制剂(如苯硼酸、乙二胺四乙酸和氯唑西林)的协同作用,确定碳青霉烯酶产生的特征,然后使用多重 PCR 进行基因分析。最常见的 CRE 分离物是(104 个中有 62 个),其次是(104 个中有 40 个),104 个 CRE 分离物中有 2 个物种。最常见的机制是 NDM 和 OXA-48 类酶(39.4%)共同产生,其次是仅产生 NDM(19.2%)和仅产生 OXA-48 (16.3%)。NDM 是检测到的最常见基因,104 个 CRE 分离物中有 72 个(69.2%)存在 NDM,其次是 104 个分离物中有 63 个(60.6%)存在 OXA-48:金属-β-内酰胺酶(NDM)是分离物中检测到的最主要的碳青霉烯酶基因类型,NDM 和 OXA-48 酶的共同产生是最常见的耐药机制。
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