Toward Next-Generation Phenomics: Precision Medicine, Spaceflight, Astronaut Omics, and Beyond.

IF 2.2 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
Omics A Journal of Integrative Biology Pub Date : 2024-08-01 Epub Date: 2024-07-17 DOI:10.1089/omi.2024.0164
Vural Özdemir
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Abstract

Large investments over many decades in genomics in diverse fields such as precision medicine, plant biology, and recently, in space life science research and astronaut omics were not accompanied by a commensurate focus on high-throughput and granular characterization of phenotypes, thus resulting in a "phenomics lag" in systems science. There are also limits to what can be achieved through increases in sample sizes in genotype-phenotype association studies without commensurate advances in phenomics. These challenges beg a question. What might next-generation phenomics look like, given that the Internet of Things and artificial intelligence offer prospects and challenges for high-throughput digital phenotyping as a key component of next-generation phenomics? While attempting to answer this question, I also reflect on governance of digital technology and next-generation phenomics. I argue that it is timely to broaden the technical discourses through a lens of political theory. In this context, this analysis briefly engages with the recent book "The Earthly Community: Reflections on the Last Utopia," written by the historian and political theorist Achille Mbembe. The question posed by the book, "Will we be able to invent different modes of measuring that might open up the possibility of a different aesthetics, a different politics of inhabiting the Earth, of repairing and sharing the planet?" is directly relevant to healing of human diseases in ways that are cognizant of the interdependency of human and nonhuman animal health, and critical and historically informed governance of digital technologies that promise to benefit next-generation phenomics.

迈向下一代表型组学:精准医学、太空飞行、宇航员表型组学及其他》(Precision Medicine, Spaceflight, Astronaut Omics, and Beyond)。
几十年来,基因组学在精准医学、植物生物学以及最近在空间生命科学研究和宇航员表型学等不同领域的大量投资,并没有伴随着对表型的高通量和细粒度特征描述的相应关注,从而导致了系统科学中的 "表型学滞后"。在表型组学没有取得相应进展的情况下,通过增加基因型-表型关联研究的样本量所能取得的成果也是有限的。这些挑战提出了一个问题。鉴于物联网和人工智能为作为下一代表型组学关键组成部分的高通量数字表型分析提供了前景和挑战,下一代表型组学可能是什么样的呢?在试图回答这个问题的同时,我也对数字技术和下一代表型组学的管理进行了思考。我认为,现在是通过政治理论的视角来拓宽技术论述的时候了。在此背景下,本分析简要地结合了最近出版的《地球共同体》一书:该书由历史学家和政治理论家阿奇尔-姆本贝(Achille Mbembe)撰写。该书提出的问题是:"我们是否能够发明不同的测量模式,从而开启一种不同的美学,一种不同的居住地球、修复和分享地球的政治学的可能性?"这个问题直接关系到以认识到人类和非人类动物健康相互依存关系的方式治疗人类疾病,以及对有望造福于下一代表型组学的数字技术进行批判性的、有历史依据的治理。
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来源期刊
Omics A Journal of Integrative Biology
Omics A Journal of Integrative Biology 生物-生物工程与应用微生物
CiteScore
6.00
自引率
12.10%
发文量
62
审稿时长
3 months
期刊介绍: OMICS: A Journal of Integrative Biology is the only peer-reviewed journal covering all trans-disciplinary OMICs-related areas, including data standards and sharing; applications for personalized medicine and public health practice; and social, legal, and ethics analysis. The Journal integrates global high-throughput and systems approaches to 21st century science from “cell to society” – seen from a post-genomics perspective.
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