Unveiling vertebrate development dynamics in frog Xenopus laevis using micro-CT imaging.

IF 11.8 2区 生物学 Q1 MULTIDISCIPLINARY SCIENCES
Jakub Laznovsky, Michaela Kavkova, Alice Helena Reis, Pavla Robovska-Havelkova, Lorena Agostini Maia, Jan Krivanek, Tomas Zikmund, Jozef Kaiser, Marcela Buchtova, Jakub Harnos
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引用次数: 0

Abstract

Background: Xenopus laevis, the African clawed frog, is a versatile vertebrate model organism in various biological disciplines, prominently in developmental biology to study body plan reorganization during metamorphosis. However, a notable gap exists in the availability of comprehensive datasets encompassing Xenopus' late developmental stages.

Findings: This study utilized micro-computed tomography (micro-CT), a noninvasive 3-dimensional (3D) imaging technique with micrometer-scale resolution, to explore the developmental dynamics and morphological changes in Xenopus laevis. Our approach involved generating high-resolution images and computed 3D models of developing Xenopus specimens, spanning from premetamorphosis tadpoles to fully mature adults. This dataset enhances our understanding of vertebrate development and supports various analyses. We conducted a careful examination, analyzing body size, shape, and morphological features, focusing on skeletogenesis, teeth, and organs like the brain and gut at different stages. Our analysis yielded valuable insights into 3D morphological changes during Xenopus' development, documenting details previously unrecorded. These datasets hold the solid potential for further morphological and morphometric analyses, including segmentation of hard and soft tissues.

Conclusions: Our repository of micro-CT scans represents a significant resource that can enhance our understanding of Xenopus' development and the associated morphological changes in the future. The widespread utility of this amphibian species, coupled with the exceptional quality of our scans, which encompass a comprehensive series of developmental stages, opens up extensive opportunities for their broader research application. Moreover, these scans can be used in virtual reality, 3D printing, and educational contexts, further expanding their value and impact.

利用微型计算机断层扫描成像技术揭示蛙类的脊椎动物发育动态。
背景:非洲爪蛙(Xenopus laevis)是一种用途广泛的脊椎动物模式生物,可用于多个生物学学科,尤其是发育生物学领域,用于研究变态过程中的体表重组。然而,在提供涵盖爪蟾后期发育阶段的综合数据集方面存在明显差距:本研究利用微计算机断层扫描(micro-CT)--一种具有微米级分辨率的非侵入性三维成像技术--来探索非洲爪蟾的发育动态和形态变化。我们的方法包括生成从变态前蝌蚪到完全成熟成体的高分辨率图像和三维模型。这一数据集增强了我们对脊椎动物发育的了解,并为各种分析提供了支持。我们进行了仔细的检查,分析了身体的大小、形状和形态特征,重点是不同阶段的骨骼形成、牙齿以及大脑和肠道等器官。我们的分析获得了关于爪蟾发育过程中三维形态变化的宝贵见解,记录了以前从未记录过的细节。这些数据集为进一步的形态学和形态计量学分析(包括软硬组织的分割)提供了坚实的基础:我们的微型计算机断层扫描资料库是一个重要的资源库,可以增强我们对章鱼发育和未来相关形态变化的了解。这种两栖动物用途广泛,加上我们的扫描质量优异,涵盖了一系列全面的发育阶段,为其更广泛的研究应用开辟了广阔的机会。此外,这些扫描还可用于虚拟现实、3D 打印和教育领域,进一步扩大其价值和影响。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
GigaScience
GigaScience MULTIDISCIPLINARY SCIENCES-
CiteScore
15.50
自引率
1.10%
发文量
119
审稿时长
1 weeks
期刊介绍: GigaScience seeks to transform data dissemination and utilization in the life and biomedical sciences. As an online open-access open-data journal, it specializes in publishing "big-data" studies encompassing various fields. Its scope includes not only "omic" type data and the fields of high-throughput biology currently serviced by large public repositories, but also the growing range of more difficult-to-access data, such as imaging, neuroscience, ecology, cohort data, systems biology and other new types of large-scale shareable data.
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