Staining to machine learning: An emerging technology for determination of microalgal cell viability

IF 2.8 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
Taehee Kim, Biswajita Pradhan, Jang-Seu Ki
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Abstract

Microalgae are unicellular photosynthetic microorganisms typically found in aquatic environments and they play a vital role in the global carbon and energy cycles. Discrimination of dead and live cells is an important factor in microalgae research and environmental monitoring. Numerous research on the effects of various microalgae has been conducted concerning cell viability. Recently, dyes such as Trypan Blue (TB), Evans Blue (EB), and Neutral Red (NR) have been employed to assess the viability of microalgae. Existing approaches for identifying dead and living microalgal cells all have flaws, such as the requirement for staining and pre-treatment. A machine learning method was created to distinguish the living and dead microalgal cells by using of a digital holography microscopy, and the accuracy of this technique was greater. The machine learning method offers a new way of studying both freshwater and marine microalgal cell cultures. This review focuses on the existing methods and emerging technology for determining dead and living microalgae cells. This review work will enlighten the new research for the detection of live or dead microalgae.

Abstract Image

从染色到机器学习:测定微藻细胞活力的新兴技术
微藻是一种单细胞光合微生物,通常存在于水生环境中,在全球碳和能量循环中发挥着重要作用。区分死细胞和活细胞是微藻研究和环境监测中的一个重要因素。有关各种微藻对细胞活力影响的研究不胜枚举。最近,人们使用胰蓝(TB)、伊万蓝(EB)和中性红(NR)等染料来评估微藻的活力。现有的识别死活微藻细胞的方法都存在缺陷,如需要染色和预处理。通过使用数字全息显微镜,创建了一种机器学习方法来区分微藻活细胞和死细胞,该技术的准确性更高。机器学习方法为淡水和海洋微藻细胞培养提供了一种新的研究方法。本综述重点介绍了用于确定微藻死细胞和活细胞的现有方法和新兴技术。本综述将对检测微藻活体或死体的新研究有所启发。
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来源期刊
Journal of Applied Phycology
Journal of Applied Phycology 生物-海洋与淡水生物学
CiteScore
6.80
自引率
9.10%
发文量
212
审稿时长
2.8 months
期刊介绍: The Journal of Applied Phycology publishes work on the rapidly expanding subject of the commercial use of algae. The journal accepts submissions on fundamental research, development of techniques and practical applications in such areas as algal and cyanobacterial biotechnology and genetic engineering, tissues culture, culture collections, commercially useful micro-algae and their products, mariculture, algalization and soil fertility, pollution and fouling, monitoring, toxicity tests, toxic compounds, antibiotics and other biologically active compounds. Each issue of the Journal of Applied Phycology also includes a short section for brief notes and general information on new products, patents and company news.
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