A comprehensive review of computational cell cycle models in guiding cancer treatment strategies.

IF 3.5 2区 生物学 Q1 MATHEMATICAL & COMPUTATIONAL BIOLOGY
Chenhui Ma, Evren Gurkan-Cavusoglu
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引用次数: 0

Abstract

This article reviews the current knowledge and recent advancements in computational modeling of the cell cycle. It offers a comparative analysis of various modeling paradigms, highlighting their unique strengths, limitations, and applications. Specifically, the article compares deterministic and stochastic models, single-cell versus population models, and mechanistic versus abstract models. This detailed analysis helps determine the most suitable modeling framework for various research needs. Additionally, the discussion extends to the utilization of these computational models to illuminate cell cycle dynamics, with a particular focus on cell cycle viability, crosstalk with signaling pathways, tumor microenvironment, DNA replication, and repair mechanisms, underscoring their critical roles in tumor progression and the optimization of cancer therapies. By applying these models to crucial aspects of cancer therapy planning for better outcomes, including drug efficacy quantification, drug discovery, drug resistance analysis, and dose optimization, the review highlights the significant potential of computational insights in enhancing the precision and effectiveness of cancer treatments. This emphasis on the intricate relationship between computational modeling and therapeutic strategy development underscores the pivotal role of advanced modeling techniques in navigating the complexities of cell cycle dynamics and their implications for cancer therapy.

Abstract Image

全面评述用于指导癌症治疗策略的计算细胞周期模型。
本文回顾了细胞周期计算建模的现有知识和最新进展。文章对各种建模范式进行了比较分析,强调了它们各自独特的优势、局限性和应用。具体来说,文章比较了确定性模型和随机模型、单细胞模型和群体模型,以及机理模型和抽象模型。这一详细分析有助于确定最适合各种研究需求的建模框架。此外,讨论还扩展到利用这些计算模型来阐明细胞周期动力学,尤其侧重于细胞周期活力、与信号通路的串扰、肿瘤微环境、DNA 复制和修复机制,强调它们在肿瘤进展和优化癌症疗法中的关键作用。通过将这些模型应用于癌症治疗计划的关键环节,包括药物疗效量化、药物发现、耐药性分析和剂量优化,综述强调了计算洞察力在提高癌症治疗的精确性和有效性方面的巨大潜力。对计算建模和治疗策略开发之间错综复杂关系的强调,突出了先进建模技术在驾驭复杂的细胞周期动力学及其对癌症治疗的影响方面的关键作用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
NPJ Systems Biology and Applications
NPJ Systems Biology and Applications Mathematics-Applied Mathematics
CiteScore
5.80
自引率
0.00%
发文量
46
审稿时长
8 weeks
期刊介绍: npj Systems Biology and Applications is an online Open Access journal dedicated to publishing the premier research that takes a systems-oriented approach. The journal aims to provide a forum for the presentation of articles that help define this nascent field, as well as those that apply the advances to wider fields. We encourage studies that integrate, or aid the integration of, data, analyses and insight from molecules to organisms and broader systems. Important areas of interest include not only fundamental biological systems and drug discovery, but also applications to health, medical practice and implementation, big data, biotechnology, food science, human behaviour, broader biological systems and industrial applications of systems biology. We encourage all approaches, including network biology, application of control theory to biological systems, computational modelling and analysis, comprehensive and/or high-content measurements, theoretical, analytical and computational studies of system-level properties of biological systems and computational/software/data platforms enabling such studies.
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