Computationally Efficient Sampling Methods for Sparsity Promoting Hierarchical Bayesian Models

IF 4.6 Q2 MATERIALS SCIENCE, BIOMATERIALS
D. Calvetti, E. Somersalo
{"title":"Computationally Efficient Sampling Methods for Sparsity Promoting Hierarchical Bayesian Models","authors":"D. Calvetti, E. Somersalo","doi":"10.1137/23m1564043","DOIUrl":null,"url":null,"abstract":"SIAM/ASA Journal on Uncertainty Quantification, Volume 12, Issue 2, Page 524-548, June 2024. <br/> Abstract.Bayesian hierarchical models have been demonstrated to provide efficient algorithms for finding sparse solutions to ill-posed inverse problems. The models comprise typically a conditionally Gaussian prior model for the unknown, augmented by a hyperprior model for the variances. A widely used choice for the hyperprior is a member of the family of generalized gamma distributions. Most of the work in the literature has concentrated on numerical approximation of the maximum a posteriori estimates, and less attention has been paid on sampling methods or other means for uncertainty quantification. Sampling from the hierarchical models is challenging mainly for two reasons: The hierarchical models are typically high dimensional, thus suffering from the curse of dimensionality, and the strong correlation between the unknown of interest and its variance can make sampling rather inefficient. This work addresses mainly the first one of these obstacles. By using a novel reparametrization, it is shown how the posterior distribution can be transformed into one dominated by a Gaussian white noise, allowing sampling by using the preconditioned Crank–Nicholson (pCN) scheme that has been shown to be efficient for sampling from distributions dominated by a Gaussian component. Furthermore, a novel idea for speeding up the pCN in a special case is developed, and the question of how strongly the hierarchical models are concentrated on sparse solutions is addressed in light of a computed example.","PeriodicalId":2,"journal":{"name":"ACS Applied Bio Materials","volume":null,"pages":null},"PeriodicalIF":4.6000,"publicationDate":"2024-06-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"ACS Applied Bio Materials","FirstCategoryId":"5","ListUrlMain":"https://doi.org/10.1137/23m1564043","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"MATERIALS SCIENCE, BIOMATERIALS","Score":null,"Total":0}
引用次数: 0

Abstract

SIAM/ASA Journal on Uncertainty Quantification, Volume 12, Issue 2, Page 524-548, June 2024.
Abstract.Bayesian hierarchical models have been demonstrated to provide efficient algorithms for finding sparse solutions to ill-posed inverse problems. The models comprise typically a conditionally Gaussian prior model for the unknown, augmented by a hyperprior model for the variances. A widely used choice for the hyperprior is a member of the family of generalized gamma distributions. Most of the work in the literature has concentrated on numerical approximation of the maximum a posteriori estimates, and less attention has been paid on sampling methods or other means for uncertainty quantification. Sampling from the hierarchical models is challenging mainly for two reasons: The hierarchical models are typically high dimensional, thus suffering from the curse of dimensionality, and the strong correlation between the unknown of interest and its variance can make sampling rather inefficient. This work addresses mainly the first one of these obstacles. By using a novel reparametrization, it is shown how the posterior distribution can be transformed into one dominated by a Gaussian white noise, allowing sampling by using the preconditioned Crank–Nicholson (pCN) scheme that has been shown to be efficient for sampling from distributions dominated by a Gaussian component. Furthermore, a novel idea for speeding up the pCN in a special case is developed, and the question of how strongly the hierarchical models are concentrated on sparse solutions is addressed in light of a computed example.
促进稀疏性的层次贝叶斯模型的计算高效采样方法
SIAM/ASA Journal on Uncertainty Quantification,第12卷,第2期,第524-548页,2024年6月。 摘要.贝叶斯层次模型已被证明能提供高效算法,用于寻找问题逆问题的稀疏解。这些模型通常由未知数的条件高斯先验模型和方差的超先验模型组成。超先验模型广泛使用的是广义伽马分布系列中的一个成员。文献中的大部分工作都集中在最大后验估计值的数值近似上,而较少关注不确定性量化的抽样方法或其他手段。从层次模型中取样具有挑战性,主要有两个原因:分层模型通常维度很高,因此会受到维度诅咒的影响,而且相关未知数与其方差之间的强相关性会使抽样效率相当低。这项研究主要解决了第一个障碍。通过使用一种新颖的重参数化方法,证明了如何将后验分布转化为由高斯白噪声主导的分布,从而可以使用预处理克兰-尼科尔森(pCN)方案进行采样,该方案已被证明可以高效地从由高斯成分主导的分布中进行采样。此外,我们还提出了一个在特殊情况下加快 pCN 速度的新想法,并根据一个计算实例探讨了分层模型在多大程度上集中于稀疏解的问题。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
ACS Applied Bio Materials
ACS Applied Bio Materials Chemistry-Chemistry (all)
CiteScore
9.40
自引率
2.10%
发文量
464
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信