A first-principles geometric model for dynamics of motor-driven centrosomal asters

Yuan-Nan Young, Vicente Gomez Herrera, Helena Z. Huan, Reza Farhadifar, Michael J. Shelley
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Abstract

The centrosomal aster is a mobile cellular organelle that exerts and transmits forces necessary for nuclear migration and spindle positioning. Recent experimental and theoretical studies of nematode and human cells demonstrate that pulling forces on asters by cortical force generators are dominant during such processes. We present a comprehensive investigation of a first-principles model of aster dynamics, the S-model (S for stoichiometry), based solely on such forces. The model evolves the astral centrosome position, a probability field of cell-surface motor occupancy by centrosomal microtubules (under an assumption of stoichiometric binding), and free boundaries of unattached, growing microtubules. We show how cell shape affects the centering stability of the aster, and its transition to oscillations with increasing motor number. Seeking to understand observations in single-cell nematode embryos, we use accurate simulations to examine the nonlinear structures of the bifurcations, and demonstrate the importance of binding domain overlap to interpreting genetic perturbation experiments. We find a rich dynamical landscape, dependent upon cell shape, such as internal equatorial orbits of asters that can be seen as traveling wave solutions. Finally, we study the interactions of multiple asters and demonstrate an effective mutual repulsion due to their competition for cortical force generators. We find, amazingly, that asters can relax onto the vertices of platonic and non-platonic solids, closely mirroring the results of the classical Thomson problem for energy-minimizing configurations of electrons constrained to a sphere and interacting via repulsive Coulomb potentials. Our findings both explain experimental observations, providing insights into the mechanisms governing spindle positioning and cell division dynamics, and show the possibility of new nonlinear phenomena in cell biology.
马达驱动中心体星体动力学的第一原理几何模型
最近对线虫和人类细胞进行的实验和理论研究表明,在这些过程中,皮质力发生器对星体的拉力占主导地位。我们提出了一个完全基于这种拉力的星体动力学第一原理模型--S 模型(S 代表化学计量学)--的全面研究。该模型演化了星状中心体位置、中心体微管占据细胞表面马达的概率场(假设为化学计量结合)以及未连接的、生长中的微管的自由边界。我们展示了细胞形状如何影响ster的居中稳定性,以及ster如何随着马达数量的增加而过渡到振荡。为了理解在单细胞线虫胚胎中的观察结果,我们使用精确的模拟来研究分叉的非线性结构,并证明了结合域重叠对解释遗传扰动实验的重要性。我们发现了丰富的动态全景,这取决于细胞的形状,例如可被视为行波解的内部赤道轨道。最后,我们研究了多个星体之间的相互作用,并证明了由于它们对皮质力发生器的竞争而产生的有效互斥。我们惊人地发现,星体可以松弛到柏拉图和非柏拉图固体的顶点上,这密切反映了经典汤姆逊问题的结果,即电子的能量最小化构型受限于一个球体,并通过排斥性库仑势相互作用。我们的发现既解释了实验观察结果,提供了对主轴定位和细胞分裂动力学机制的见解,又展示了细胞生物学中新的非线性现象的可能性。
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