Jamie Liam Guest, Esther A. E. Bourne, Martin A. Screen, Mark Richard Wilson, Tran N. Pham, Paul Hodgkinson
{"title":"The essential synergy of MD simulation and NMR in understanding amorphous drug forms","authors":"Jamie Liam Guest, Esther A. E. Bourne, Martin A. Screen, Mark Richard Wilson, Tran N. Pham, Paul Hodgkinson","doi":"10.1039/d4fd00097h","DOIUrl":null,"url":null,"abstract":"Molecular dynamics (MD) simulations and chemical shifts from machine learning are used to predict <small><sup>15</sup></small>N, <small><sup>13</sup></small>C and <small><sup>1</sup></small>H chemical shifts for the amorphous form of the drug irbesartan. The molecules are observed to be highly dynamic well below the glass transition, and averaging over this dynamics is essential to understanding the observed NMR shifts. Predicted linewidths are consistently about 2 ppm narrower than observed experimentally, which is hypothesised to result from susceptibility effects. Previously observed differences in the <small><sup>13</sup></small>C shifts associated with the two tetrazole tautomers can be rationalised in terms of differing conformational dynamics associated with the presence of intramolecular interaction in one tautomer. <small><sup>1</sup></small>H shifts associated with hydrogen bonding can also be rationalised in terms of differing average frequencies of transient hydrogen bonding interactions.","PeriodicalId":76,"journal":{"name":"Faraday Discussions","volume":"26 1","pages":""},"PeriodicalIF":3.3000,"publicationDate":"2024-06-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Faraday Discussions","FirstCategoryId":"92","ListUrlMain":"https://doi.org/10.1039/d4fd00097h","RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"CHEMISTRY, PHYSICAL","Score":null,"Total":0}
引用次数: 0
Abstract
Molecular dynamics (MD) simulations and chemical shifts from machine learning are used to predict 15N, 13C and 1H chemical shifts for the amorphous form of the drug irbesartan. The molecules are observed to be highly dynamic well below the glass transition, and averaging over this dynamics is essential to understanding the observed NMR shifts. Predicted linewidths are consistently about 2 ppm narrower than observed experimentally, which is hypothesised to result from susceptibility effects. Previously observed differences in the 13C shifts associated with the two tetrazole tautomers can be rationalised in terms of differing conformational dynamics associated with the presence of intramolecular interaction in one tautomer. 1H shifts associated with hydrogen bonding can also be rationalised in terms of differing average frequencies of transient hydrogen bonding interactions.