The Novel-B-Cell-Related Gene Signature Predicts the Prognosis and Immune Status of Patients with Esophageal Carcinoma.

IF 1.6 Q4 ONCOLOGY
Journal of Gastrointestinal Cancer Pub Date : 2024-09-01 Epub Date: 2024-07-04 DOI:10.1007/s12029-024-01083-x
Xinhong Li, Tongyu Sun, Hongyan Li, Juan Liu, Na Huang, Surong Liu
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引用次数: 0

Abstract

Background: The current understanding of the prognostic significance of B cells and their role in the tumor microenvironment (TME) in esophageal carcinoma (ESCA) is limited.

Methods: We conducted a screening for B-cell-related genes through the analysis of single-cell transcriptome data. Subsequently, we developed a B-cell-related gene signature (BRGrisk) using LASSO regression analysis. Patients from The Cancer Genome Atlas cohort were divided into a training cohort and a test cohort. Patients were categorized into high- and low-risk groups based on their median BRGrisk scores. The overall survival was assessed using the Kaplan-Meier method, and a nomogram based on BRGrisk was constructed. Immune infiltration profiles between the risk groups were also compared.

Results: The BRGrisk prognostic model indicated significantly worse outcomes for patients with high BRGrisk scores (p < 0.001). The BRGrisk-based nomogram exhibited good prognostic performance. Analysis of immune infiltration revealed that patients in the high-BRGrisk group had notably higher levels of immune cell infiltration and were more likely to be in an immunoresponsive state. Enrichment analysis showed a strong correlation between the prognostic gene signature and cancer-related pathways. IC50 results indicated that patients in the low-BRGrisk group were more responsive to common drugs compared to those in the high-BRGrisk group.

Conclusions: This study presents a novel BRGrisk that can be used to stratify the prognosis of ESCA patients and may offer guidance for personalized treatment strategies aimed at improving prognosis.

新B细胞相关基因特征可预测食管癌患者的预后和免疫状态
背景:目前对食管癌(ESCA)中B细胞的预后意义及其在肿瘤微环境(TME)中的作用的了解有限:目前对食管癌(ESCA)中B细胞的预后意义及其在肿瘤微环境(TME)中的作用的了解还很有限:方法:我们通过分析单细胞转录组数据筛选了与B细胞相关的基因。方法:我们通过分析单细胞转录组数据筛选出B细胞相关基因,随后利用LASSO回归分析建立了B细胞相关基因特征(BRGrisk)。来自癌症基因组图谱队列的患者被分为训练队列和测试队列。根据BRGrisk评分的中位数将患者分为高危和低危两组。采用 Kaplan-Meier 法评估总生存率,并构建了基于 BRGrisk 的提名图。此外,还比较了各风险组之间的免疫浸润情况:结果:BRGrisk预后模型显示,BRGrisk评分高的患者预后明显较差(p 结论:该研究提出了一种新的BRGrisk预后模型:本研究提出了一种新的 BRGrisk,可用于对 ESCA 患者的预后进行分层,并可为旨在改善预后的个性化治疗策略提供指导。
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来源期刊
CiteScore
3.80
自引率
0.00%
发文量
121
期刊介绍: The Journal of Gastrointestinal Cancer is a multidisciplinary medium for the publication of novel research pertaining to cancers arising from the gastrointestinal tract.The journal is dedicated to the most rapid publication possible.The journal publishes papers in all relevant fields, emphasizing those studies that are helpful in understanding and treating cancers affecting the esophagus, stomach, liver, gallbladder and biliary tree, pancreas, small bowel, large bowel, rectum, and anus. In addition, the Journal of Gastrointestinal Cancer publishes basic and translational scientific information from studies providing insight into the etiology and progression of cancers affecting these organs. New insights are provided from diverse areas of research such as studies exploring pre-neoplastic states, risk factors, epidemiology, genetics, preclinical therapeutics, surgery, radiation therapy, novel medical therapeutics, clinical trials, and outcome studies.In addition to reports of original clinical and experimental studies, the journal also publishes: case reports, state-of-the-art reviews on topics of immediate interest or importance; invited articles analyzing particular areas of pancreatic research and knowledge; perspectives in which critical evaluation and conflicting opinions about current topics may be expressed; meeting highlights that summarize important points presented at recent meetings; abstracts of symposia and conferences; book reviews; hypotheses; Letters to the Editors; and other items of special interest, including:Complex Cases in GI Oncology:  This is a new initiative to provide a forum to review and discuss the history and management of complex and involved gastrointestinal oncology cases. The format will be similar to a teaching case conference where a case vignette is presented and is followed by a series of questions and discussion points. A brief reference list supporting the points made in discussion would be expected.
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