Stochastic Class-Attention Net to Detect the Breast Carcinoma Subtypes With Test Time Augmentation

IF 3 4区 计算机科学 Q2 ENGINEERING, ELECTRICAL & ELECTRONIC
Vivek Harshey, Amar Partap Singh Pharwaha
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Abstract

Despite advances in medical sciences, breast cancer remains a deadly disease globally, primarily affecting women. Fortunately, studies claim that breast cancer is treatable if diagnosed early. Late diagnoses have poor prognoses and can affect the patient's quality of life. Therefore, a significant research body is dedicated to establishing and identifying the disease at an initial stage. Deep learning (DL) techniques are garnering attention for aiding medical professionals in detecting this disease using histopathology (HP) image modality. The heterogeneous nature of this disease subtypes results in the imbalances of benign and malignant subtypes. From a DL point of view, this becomes an imbalanced problem deserving special care. Unfortunately, current DL-based techniques do not fully address this issue and suffer from poor metrics and robustness. In this work, we present a DL-based breast cancer automatic detection system (BCADS) using a novel architecture stochastic class-attention net (SCAN). This technique performed better when combined with label smoothing and test time augmentation. This work outperforms the previously reported results for binary and multiclass on the BreaKHis dataset. Also, we validated our method on separate BACH and BCNB datasets to prove its effectiveness and clinical relevancy. We hope that the designed BCADS will help the treating doctor and pathologist in a meaningful way and thus help to reduce the impact of this deadly disease.

利用随机类注意力网检测乳腺癌亚型并延长检测时间
尽管医学在不断进步,但乳腺癌仍然是全球范围内一种致命的疾病,主要影响女性。幸运的是,研究表明,乳腺癌如果早期诊断,是可以治疗的。晚期诊断预后不佳,会影响患者的生活质量。因此,大量研究机构致力于在初期阶段确定和识别疾病。深度学习(DL)技术在帮助医疗专业人员利用组织病理学(HP)图像模式检测这种疾病方面备受关注。这种疾病亚型的异质性导致良性和恶性亚型的不平衡。从 DL 的角度来看,这是一个值得特别关注的不平衡问题。遗憾的是,目前基于 DL 的技术并不能完全解决这个问题,而且指标和鲁棒性都很差。在这项工作中,我们提出了一种基于 DL 的乳腺癌自动检测系统 (BCADS),该系统采用了一种新型结构随机类关注网 (SCAN)。该技术在与标签平滑和测试时间增强相结合时表现更佳。在 BreaKHis 数据集上,这项工作的二分类和多分类结果优于之前报告的结果。此外,我们还在单独的 BACH 和 BCNB 数据集上验证了我们的方法,以证明其有效性和临床相关性。我们希望所设计的 BCADS 能为医生和病理学家提供有意义的帮助,从而减少这一致命疾病的影响。
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来源期刊
International Journal of Imaging Systems and Technology
International Journal of Imaging Systems and Technology 工程技术-成像科学与照相技术
CiteScore
6.90
自引率
6.10%
发文量
138
审稿时长
3 months
期刊介绍: The International Journal of Imaging Systems and Technology (IMA) is a forum for the exchange of ideas and results relevant to imaging systems, including imaging physics and informatics. The journal covers all imaging modalities in humans and animals. IMA accepts technically sound and scientifically rigorous research in the interdisciplinary field of imaging, including relevant algorithmic research and hardware and software development, and their applications relevant to medical research. The journal provides a platform to publish original research in structural and functional imaging. The journal is also open to imaging studies of the human body and on animals that describe novel diagnostic imaging and analyses methods. Technical, theoretical, and clinical research in both normal and clinical populations is encouraged. Submissions describing methods, software, databases, replication studies as well as negative results are also considered. The scope of the journal includes, but is not limited to, the following in the context of biomedical research: Imaging and neuro-imaging modalities: structural MRI, functional MRI, PET, SPECT, CT, ultrasound, EEG, MEG, NIRS etc.; Neuromodulation and brain stimulation techniques such as TMS and tDCS; Software and hardware for imaging, especially related to human and animal health; Image segmentation in normal and clinical populations; Pattern analysis and classification using machine learning techniques; Computational modeling and analysis; Brain connectivity and connectomics; Systems-level characterization of brain function; Neural networks and neurorobotics; Computer vision, based on human/animal physiology; Brain-computer interface (BCI) technology; Big data, databasing and data mining.
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