eDNA-based survey of the marine vertebrate biodiversity off the west coast of Guadeloupe (French West Indies).

IF 1 4区环境科学与生态学 Q3 BIODIVERSITY CONSERVATION

Biodiversity Data Journal Pub Date : 2024-06-21 eCollection Date: 2024-01-01 DOI:10.3897/BDJ.12.e125348

Rachel Haderlé, Laurent Bouveret, Jordane Chazal, Justine Girardet, Samuel Iglésias, Pascal-Jean Lopez, Cédric Millon, Alice Valentini, Visotheary Ung, Jean-Luc Jung

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引用次数: 0

Abstract

Background: In the marine environment, knowledge of biodiversity remains incomplete for many taxa, requiring assessments to understand and monitor biodiversity loss. Environmental DNA (eDNA) metabarcoding is a powerful tool for monitoring marine biodiversity, as it enables several taxa to be characterised simultaneously in a single sample. However, the data generated by environmental DNA metabarcoding are often not easily reusable. Implementing FAIR principles and standards for eDNA-derived data can facilitate data-sharing within the scientific community.

New information: This study focuses on the detection of marine vertebrate biodiversity using eDNA metabarcoding on the leeward coast of Guadeloupe, a known hotspot for marine biodiversity in the French West Indies. Occurrences and DNA-derived data are shared here using DarwinCore standards combined with MIMARKS standards.

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基于 eDNA 的瓜德罗普岛（法属西印度群岛）西海岸海洋脊椎动物生物多样性调查。

背景：在海洋环境中，许多分类群的生物多样性知识仍不完整，需要进行评估以了解和监测生物多样性的丧失。环境 DNA（eDNA）代谢标码是监测海洋生物多样性的有力工具，因为它能在单一样本中同时描述多个类群的特征。然而，环境 DNA 元标码生成的数据通常不易重复使用。对 eDNA 衍生数据实施 FAIR 原则和标准可促进科学界的数据共享：这项研究的重点是在瓜德罗普岛背风海岸利用 eDNA 代谢标定法检测海洋脊椎动物的生物多样性，瓜德罗普岛是法属西印度群岛已知的海洋生物多样性热点地区。这里采用达尔文核心标准（DarwinCore standards）和MIMARKS标准（MIMARKS standards）共享出现和DNA衍生数据。

本文章由计算机程序翻译，如有差异，请以英文原文为准。

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来源期刊

Biodiversity Data Journal Agricultural and Biological Sciences-Ecology, Evolution, Behavior and Systematics

CiteScore

2.20

自引率

7.70%

发文量

283

审稿时长

6 weeks

期刊介绍： Biodiversity Data Journal (BDJ) is a community peer-reviewed, open-access, comprehensive online platform, designed to accelerate publishing, dissemination and sharing of biodiversity-related data of any kind. All structural elements of the articles – text, morphological descriptions, occurrences, data tables, etc. – will be treated and stored as DATA, in accordance with the Data Publishing Policies and Guidelines of Pensoft Publishers. The journal will publish papers in biodiversity science containing taxonomic, floristic/faunistic, morphological, genomic, phylogenetic, ecological or environmental data on any taxon of any geological age from any part of the world with no lower or upper limit to manuscript size.