{"title":"Faster-BNI: Fast Parallel Exact Inference on Bayesian Networks","authors":"Jiantong Jiang;Zeyi Wen;Atif Mansoor;Ajmal Mian","doi":"10.1109/TPDS.2024.3414177","DOIUrl":null,"url":null,"abstract":"Bayesian networks (BNs) have recently attracted more attention, because they are interpretable machine learning models and enable a direct representation of causal relations between variables. However, exact inference on BNs is time-consuming, especially for complex problems, which hinders the widespread adoption of BNs. To improve the efficiency, we propose a fast BN exact inference named Faster-BNI on multi-core CPUs. Faster-BNI enhances the efficiency of a well-known BN exact inference algorithm, namely the junction tree algorithm, through hybrid parallelism that tightly integrates coarse- and fine-grained parallelism. Moreover, we identify that the bottleneck of BN exact inference methods lies in recursively updating the potential tables of the network. To reduce the table update cost, Faster-BNI employs novel optimizations, including the reduction of potential tables and re-organizing the potential table storage, to avoid unnecessary memory consumption and simplify potential table operations. Comprehensive experiments on real-world BNs show that the sequential version of Faster-BNI outperforms existing sequential implementation by 9 to 22 times, and the parallel version of Faster-BNI achieves up to 11 times faster inference than its parallel counterparts.","PeriodicalId":13257,"journal":{"name":"IEEE Transactions on Parallel and Distributed Systems","volume":"35 8","pages":"1444-1455"},"PeriodicalIF":5.6000,"publicationDate":"2024-06-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"IEEE Transactions on Parallel and Distributed Systems","FirstCategoryId":"94","ListUrlMain":"https://ieeexplore.ieee.org/document/10556819/","RegionNum":2,"RegionCategory":"计算机科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"COMPUTER SCIENCE, THEORY & METHODS","Score":null,"Total":0}
引用次数: 0
Abstract
Bayesian networks (BNs) have recently attracted more attention, because they are interpretable machine learning models and enable a direct representation of causal relations between variables. However, exact inference on BNs is time-consuming, especially for complex problems, which hinders the widespread adoption of BNs. To improve the efficiency, we propose a fast BN exact inference named Faster-BNI on multi-core CPUs. Faster-BNI enhances the efficiency of a well-known BN exact inference algorithm, namely the junction tree algorithm, through hybrid parallelism that tightly integrates coarse- and fine-grained parallelism. Moreover, we identify that the bottleneck of BN exact inference methods lies in recursively updating the potential tables of the network. To reduce the table update cost, Faster-BNI employs novel optimizations, including the reduction of potential tables and re-organizing the potential table storage, to avoid unnecessary memory consumption and simplify potential table operations. Comprehensive experiments on real-world BNs show that the sequential version of Faster-BNI outperforms existing sequential implementation by 9 to 22 times, and the parallel version of Faster-BNI achieves up to 11 times faster inference than its parallel counterparts.
期刊介绍:
IEEE Transactions on Parallel and Distributed Systems (TPDS) is published monthly. It publishes a range of papers, comments on previously published papers, and survey articles that deal with the parallel and distributed systems research areas of current importance to our readers. Particular areas of interest include, but are not limited to:
a) Parallel and distributed algorithms, focusing on topics such as: models of computation; numerical, combinatorial, and data-intensive parallel algorithms, scalability of algorithms and data structures for parallel and distributed systems, communication and synchronization protocols, network algorithms, scheduling, and load balancing.
b) Applications of parallel and distributed computing, including computational and data-enabled science and engineering, big data applications, parallel crowd sourcing, large-scale social network analysis, management of big data, cloud and grid computing, scientific and biomedical applications, mobile computing, and cyber-physical systems.
c) Parallel and distributed architectures, including architectures for instruction-level and thread-level parallelism; design, analysis, implementation, fault resilience and performance measurements of multiple-processor systems; multicore processors, heterogeneous many-core systems; petascale and exascale systems designs; novel big data architectures; special purpose architectures, including graphics processors, signal processors, network processors, media accelerators, and other special purpose processors and accelerators; impact of technology on architecture; network and interconnect architectures; parallel I/O and storage systems; architecture of the memory hierarchy; power-efficient and green computing architectures; dependable architectures; and performance modeling and evaluation.
d) Parallel and distributed software, including parallel and multicore programming languages and compilers, runtime systems, operating systems, Internet computing and web services, resource management including green computing, middleware for grids, clouds, and data centers, libraries, performance modeling and evaluation, parallel programming paradigms, and programming environments and tools.