Stable multivariate lesion symptom mapping

Alex Teghipco, R. Newman-Norlund, Makayla Gibson, L. Bonilha, John Absher, Julius Fridriksson, Christopher Rorden
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Abstract

Multivariate lesion-symptom mapping (MLSM) considers lesion information across the entire brain to predict impairments. The strength of this approach is also its weakness—considering many brain features together synergistically can uncover complex brain-behavior relationships but exposes a high-dimensional feature space that a model is expected to learn. Successfully distinguishing between features in this landscape can be difficult for models, particularly in the presence of irrelevant or redundant features. Here, we propose stable multivariate lesion-symptom mapping (sMLSM), which integrates the identification of reliable features with stability selection into conventional MLSM and describe our open-source MATLAB implementation. Usage is showcased with our publicly available dataset of chronic stroke survivors (N=167) and further validated in our independent public acute stroke dataset (N = 1106). We demonstrate that sMLSM eliminates inconsistent features highlighted by MLSM, reduces variation in feature weights, enables the model to learn more complex patterns of brain damage, and improves model accuracy for predicting aphasia severity in a way that tends to be robust regarding the choice of parameters for identifying reliable features. Critically, sMLSM more consistently outperforms predictions based on lesion size alone. This advantage is evident starting at modest sample sizes (N>75). Spatial distribution of feature importance is different in sMLSM, which highlights the features identified by univariate lesion symptom mapping while also implicating select regions emphasized by MLSM. Beyond improved prediction accuracy, sMLSM can offer deeper insight into reliable biomarkers of impairment, informing our understanding of neurobiology.
稳定的多变量病变症状图谱
多变量病变症状映射(MLSM)考虑了整个大脑的病变信息,以预测损伤。这种方法的优点也是它的缺点--协同考虑许多大脑特征可以发现复杂的大脑行为关系,但同时也暴露了模型需要学习的高维特征空间。对于模型来说,要在这个空间中成功区分不同的特征是很困难的,尤其是在存在不相关或冗余特征的情况下。在此,我们提出了稳定多变量病变症状映射(sMLSM),它将可靠特征的识别与稳定性选择整合到传统的 MLSM 中,并介绍了我们的开源 MATLAB 实现。我们利用公开的慢性中风幸存者数据集(N=167)展示了其用法,并在独立的公开急性中风数据集(N=1106)中进一步验证了其有效性。我们证明,sMLSM 消除了 MLSM 突出显示的不一致特征,减少了特征权重的变化,使模型能够学习更复杂的脑损伤模式,并提高了模型预测失语症严重程度的准确性,在选择参数识别可靠特征方面趋于稳健。重要的是,sMLSM 更稳定地优于仅基于病变大小的预测。这一优势从适度的样本量(N>75)开始就很明显。在 sMLSM 中,特征重要性的空间分布是不同的,它突出了单变量病变症状映射所识别的特征,同时也牵涉到 MLSM 所强调的特定区域。除了提高预测准确性外,sMLSM 还能让我们更深入地了解损伤的可靠生物标志物,从而加深我们对神经生物学的理解。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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