Development and validation of an automatic machine learning model to predict abnormal increase of transaminase in valproic acid-treated epilepsy

IF 4.8 2区 医学 Q1 TOXICOLOGY
Hongying Ma, Sihui Huang, Fengxin Li, Zicheng Pang, Jian Luo, Danfeng Sun, Junsong Liu, Zhuoming Chen, Jian Qu, Qiang Qu
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引用次数: 0

Abstract

Valproic acid (VPA) is a primary medication for epilepsy, yet its hepatotoxicity consistently raises concerns among individuals. This study aims to establish an automated machine learning (autoML) model for forecasting the risk of abnormal increase of transaminase levels while undergoing VPA therapy for 1995 epilepsy patients. The study employed the two-tailed T test, Chi-square test, and binary logistic regression analysis, selecting six clinical parameters, including age, stature, leukocyte count, Total Bilirubin, oral dosage of VPA, and VPA concentration. These variables were used to build a risk prediction model using “H2O” autoML platform, achieving the best performance (AUC training = 0.855, AUC test = 0.789) in the training and testing data set. The model also exhibited robust accuracy (AUC valid = 0.742) in an external validation set, underscoring its credibility in anticipating VPA-induced transaminase abnormalities. The significance of the six variables was elucidated through importance ranking, partial dependence, and the TreeSHAP algorithm. This novel model offers enhanced versatility and explicability, rendering it suitable for clinicians seeking to refine parameter adjustments and address imbalanced data sets, thereby bolstering classification precision. To summarize, the personalized prediction model for VPA-treated epilepsy, established with an autoML model, displayed commendable predictive capability, furnishing clinicians with valuable insights for fostering pharmacovigilance.

Abstract Image

开发并验证预测丙戊酸治疗癫痫患者转氨酶异常升高的自动机器学习模型。
丙戊酸(VPA)是治疗癫痫的主要药物,但其肝毒性一直引起人们的关注。本研究旨在建立一个自动机器学习(autoML)模型,用于预测 1995 年癫痫患者在接受 VPA 治疗期间转氨酶水平异常升高的风险。研究采用了双尾T检验、卡方检验和二元逻辑回归分析,选择了六个临床参数,包括年龄、身材、白细胞计数、总胆红素、VPA口服剂量和VPA浓度。这些变量被用于利用 "H2O" autoML 平台建立风险预测模型,在训练和测试数据集中取得了最佳性能(AUC training = 0.855,AUC test = 0.789)。该模型在外部验证集上也表现出了很高的准确性(AUC valid = 0.742),这突出表明了它在预测 VPA 引起的转氨酶异常方面的可信度。通过重要性排序、部分依赖性和 TreeSHAP 算法阐明了六个变量的重要性。这种新型模型具有更强的通用性和可解释性,适合临床医生调整参数和处理不平衡数据集,从而提高分类精度。总之,利用 autoML 模型建立的 VPA 治疗癫痫个性化预测模型显示出了值得称道的预测能力,为临床医生提供了促进药物警戒的宝贵见解。
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来源期刊
Archives of Toxicology
Archives of Toxicology 医学-毒理学
CiteScore
11.60
自引率
4.90%
发文量
218
审稿时长
1.5 months
期刊介绍: Archives of Toxicology provides up-to-date information on the latest advances in toxicology. The journal places particular emphasis on studies relating to defined effects of chemicals and mechanisms of toxicity, including toxic activities at the molecular level, in humans and experimental animals. Coverage includes new insights into analysis and toxicokinetics and into forensic toxicology. Review articles of general interest to toxicologists are an additional important feature of the journal.
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