Comprehensive molecular evolutionary analysis of small heat shock proteins in five diploid Gossypium species.

IF 3.9 2区 生物学 Q1 GENETICS & HEREDITY
Plant Genome Pub Date : 2024-09-01 Epub Date: 2024-06-12 DOI:10.1002/tpg2.20478
Kai Fan, Zhengyi Qian, Yuxi He, Jiayuan Chen, Fangting Ye, Xiaogang Zhu, Wenxiong Lin, Lili Cui, Tao Lan, Zhaowei Li
{"title":"Comprehensive molecular evolutionary analysis of small heat shock proteins in five diploid Gossypium species.","authors":"Kai Fan, Zhengyi Qian, Yuxi He, Jiayuan Chen, Fangting Ye, Xiaogang Zhu, Wenxiong Lin, Lili Cui, Tao Lan, Zhaowei Li","doi":"10.1002/tpg2.20478","DOIUrl":null,"url":null,"abstract":"<p><p>The small heat shock proteins (sHSPs) are important components in plant growth and development, and stress response. However, a systematical understanding of the sHSP family is yet to be reported in five diploid Gossypium species. In this study, 34 GlsHSPs, 36 GrsHSPs, 37 GtsHSPs, 37 GasHSPs, and 38 GhesHSPs were identified in Gossypium longicalyx, Gossypium raimondii, Gossypium turneri, Gossypium arboreum, and Gossypium herbaceum, respectively. These sHSP members can be clustered into 10 subfamilies. Different subfamilies had different member numbers, motif distributions, gene structures, gene duplication events, gene loss numbers, and cis-regulatory elements. Besides, the paleohexaploidization event in cotton ancestor led to expanding the sHSP members and it was also inherited by five diploid Gossypium species. After the cotton ancestor divergence, the sHSP members had the relatively conserved evolution in five diploid Gossypium species. The comprehensive evolutionary history of the sHSP family was revealed in five diploid Gossypium species. Furthermore, several GasHSPs and GhesHSPs were important candidates in plant growth and development, and stress response. These current findings can provide valuable information for the molecular evolution and further functional research of the sHSP family in cotton.</p>","PeriodicalId":49002,"journal":{"name":"Plant Genome","volume":" ","pages":"e20478"},"PeriodicalIF":3.9000,"publicationDate":"2024-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Plant Genome","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1002/tpg2.20478","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/6/12 0:00:00","PubModel":"Epub","JCR":"Q1","JCRName":"GENETICS & HEREDITY","Score":null,"Total":0}
引用次数: 0

Abstract

The small heat shock proteins (sHSPs) are important components in plant growth and development, and stress response. However, a systematical understanding of the sHSP family is yet to be reported in five diploid Gossypium species. In this study, 34 GlsHSPs, 36 GrsHSPs, 37 GtsHSPs, 37 GasHSPs, and 38 GhesHSPs were identified in Gossypium longicalyx, Gossypium raimondii, Gossypium turneri, Gossypium arboreum, and Gossypium herbaceum, respectively. These sHSP members can be clustered into 10 subfamilies. Different subfamilies had different member numbers, motif distributions, gene structures, gene duplication events, gene loss numbers, and cis-regulatory elements. Besides, the paleohexaploidization event in cotton ancestor led to expanding the sHSP members and it was also inherited by five diploid Gossypium species. After the cotton ancestor divergence, the sHSP members had the relatively conserved evolution in five diploid Gossypium species. The comprehensive evolutionary history of the sHSP family was revealed in five diploid Gossypium species. Furthermore, several GasHSPs and GhesHSPs were important candidates in plant growth and development, and stress response. These current findings can provide valuable information for the molecular evolution and further functional research of the sHSP family in cotton.

五种二倍体格桑花小型热休克蛋白的全面分子进化分析。
小热休克蛋白(sHSPs)是植物生长发育和胁迫响应的重要组成部分。然而,对五种二倍体格桑花的 sHSP 家族的系统了解尚未见报道。本研究在 Gossypium longicalyx、Gossypium raimondii、Gossypium turneri、Gossypium arboreum 和 Gossypium herbaceum 中分别鉴定了 34 个 GlsHSPs、36 个 GrsHSPs、37 个 GtsHSPs、37 个 GasHSPs 和 38 个 GhesHSPs。这些 sHSP 成员可分为 10 个亚科。不同亚家族的成员数量、主题分布、基因结构、基因重复事件、基因缺失数量和顺式调控元件都各不相同。此外,棉花祖先的古六倍化事件导致了 sHSP 成员的扩大,它也被五个二倍体棉花物种所继承。棉花祖先分化后,sHSP 成员在五个二倍体棉花物种中经历了相对保守的进化。在五个二倍体棉花物种中揭示了sHSP家族的全面进化史。此外,一些 GasHSPs 和 GhesHSPs 是植物生长发育和胁迫响应中的重要候选分子。目前的这些发现可为棉花 sHSP 家族的分子进化和进一步的功能研究提供有价值的信息。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Plant Genome
Plant Genome PLANT SCIENCES-GENETICS & HEREDITY
CiteScore
6.00
自引率
4.80%
发文量
93
审稿时长
>12 weeks
期刊介绍: The Plant Genome publishes original research investigating all aspects of plant genomics. Technical breakthroughs reporting improvements in the efficiency and speed of acquiring and interpreting plant genomics data are welcome. The editorial board gives preference to novel reports that use innovative genomic applications that advance our understanding of plant biology that may have applications to crop improvement. The journal also publishes invited review articles and perspectives that offer insight and commentary on recent advances in genomics and their potential for agronomic improvement.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信