Muller’s ratchet in a near-critical regime: Tournament versus fitness proportional selection

IF 16.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY
J.L. Igelbrink , A. González Casanova , C. Smadi , A. Wakolbinger
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引用次数: 0

Abstract

Muller’s ratchet, in its prototype version, models a haploid, asexual population whose size N is constant over the generations. Slightly deleterious mutations are acquired along the lineages at a constant rate, and individuals carrying less mutations have a selective advantage. The classical variant considers fitness proportional selection, but other fitness schemes are conceivable as well. Inspired by the work of Etheridge et al. (2009) we propose a parameter scaling which fits well to the “near-critical” regime that was in the focus of Etheridge et al. (2009) (and in which the mutation–selection ratio diverges logarithmically as N). Using a Moran model, we investigate the“rule of thumb” given in Etheridge et al. (2009) for the click rate of the “classical ratchet” by putting it into the context of new results on the long-time evolution of the size of the best class of the ratchet with (binary) tournament selection. This variant of Muller’s ratchet was introduced in González Casanova et al. (2023), and was analysed there in a subcritical parameter regime. Other than that of the classical ratchet, the size of the best class of the tournament ratchet follows an autonomous dynamics up to the time of its extinction. It turns out that, under a suitable correspondence of the model parameters, this dynamics coincides with the so called Poisson profile approximation of the dynamics of the best class of the classical ratchet.

近临界机制中的穆勒棘轮:锦标赛与适应性比例选择。
穆勒棘轮模型的原型是一个单倍体无性种群,其规模 N 在世代中保持不变。轻微的有害突变以恒定的速度沿种系获得,携带较少突变的个体具有选择优势。经典变体考虑的是适合度比例选择,但也可以设想其他适合度方案。受 Etheridge 等人(2009 年)的研究启发,我们提出了一种参数缩放方法,该方法非常适合 Etheridge 等人(2009 年)重点研究的 "近临界 "机制(其中突变-选择比随着 N→∞ 的对数发散)。利用莫兰模型,我们研究了埃瑟里奇等人(2009)在 "经典棘轮 "点击率方面给出的 "经验法则",并将其与带有(二元)锦标赛选择的棘轮最佳类别大小的长期演化的新结果结合起来。González 等人(2023 年)介绍了穆勒棘轮的这一变体,并在亚临界参数机制下对其进行了分析。与经典的棘轮选择不同,锦标赛棘轮选择的最佳等级的大小在其消亡之前都是自主动态变化的。事实证明,在模型参数的适当对应关系下,这种动态与经典棘轮最佳类的动态的所谓泊松轮廓近似值相吻合。
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来源期刊
Accounts of Chemical Research
Accounts of Chemical Research 化学-化学综合
CiteScore
31.40
自引率
1.10%
发文量
312
审稿时长
2 months
期刊介绍: Accounts of Chemical Research presents short, concise and critical articles offering easy-to-read overviews of basic research and applications in all areas of chemistry and biochemistry. These short reviews focus on research from the author’s own laboratory and are designed to teach the reader about a research project. In addition, Accounts of Chemical Research publishes commentaries that give an informed opinion on a current research problem. Special Issues online are devoted to a single topic of unusual activity and significance. Accounts of Chemical Research replaces the traditional article abstract with an article "Conspectus." These entries synopsize the research affording the reader a closer look at the content and significance of an article. Through this provision of a more detailed description of the article contents, the Conspectus enhances the article's discoverability by search engines and the exposure for the research.
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